RNA–Protein interactions for RNA: ENST00000527158.2

SNRNP35-204, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best)

Gene SNRNP35, Length 2,161 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-204ENST00000527158 IL4RP24394 825 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 ATXN1P54253 815 aaKnown RBP16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 CACNA2D1P54289 1103 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 IFFO1Q0D2I5 559 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 GPNMBQ14956 572 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 DPYSL2Q16555 572 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 PRUNE1Q86TP1 453 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 MICALL1Q8N3F8 863 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 NT5C3BQ969T7 300 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 PKMYT1Q99640 499 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 PCDH9Q9HC56 1237 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 DMAP1Q9NPF5 467 aaPredicted RBP16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 AP4E1Q9UPM8 1137 aa16.87■□□□□ 0.29
SNRNP35-204ENST00000527158 B4GALT3O60512 393 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 USP17L7P0C7H9 530 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 ZSCAN5DPP0CG00 497 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 RABGGTBP53611 331 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 GPS1Q13098 491 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 CA9Q16790 459 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 C4orf50Q6ZRC1 276 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 LRRTM3Q86VH5 581 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 SPATA2LQ8IUW3 424 aaPredicted RBP16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 PSTKQ8IV42 348 aaKnown RBP16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 OTUD6BQ8N6M0 293 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 OR2W6PQ8NHA6 318 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 NPY6RQ99463 290 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 RHOBTB2Q9BYZ6 727 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 ADAM33Q9BZ11 813 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 CNOT10Q9H9A5 744 aaKnown RBP16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 TMEM30AQ9NV96 361 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 TMLHEQ9NVH6 421 aa16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 PRG3Q9Y2Y8 225 aaPredicted RBP16.86■□□□□ 0.29
SNRNP35-204ENST00000527158 HHLA1C9JL84 531 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 M0QYT0 321 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 NRP1O14786 923 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 RBP3P10745 1247 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 PECAM1P16284 738 aaPredicted RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 TGM2P21980 687 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 L1CAMP32004 1257 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 RDXP35241 583 aaKnown RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 ATN1P54259 1190 aaPredicted RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 BCAR1P56945 870 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 ZNF844Q08AG5 666 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 CEP128Q6ZU80 1094 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 TRMT10CQ7L0Y3 403 aaKnown RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 GPRIN1Q7Z2K8 1008 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 PACS2Q86VP3 889 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 NLRP14Q86W24 1093 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 SUGP1Q8IWZ8 645 aaKnown RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 GLIS1Q8NBF1 620 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 ZNF473Q8WTR7 871 aaKnown RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 TMEM209Q96SK2 561 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 FOXP3Q9BZS1 431 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 SEMA4AQ9H3S1 761 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 DNAJB4Q9UDY4 337 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 TPX2Q9ULW0 747 aaKnown RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 YJEFN3A6XGL0 299 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 DCDC2CA8MYV0 355 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 E7ENQ6 273 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 DNALI1O14645 258 aaPredicted RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 HOXA2O43364 376 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 ETS1P14921 441 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 ZFXP17010 805 aaPredicted RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 STIP1P31948 543 aaKnown RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 DEUP1Q05D60 604 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 NOMO1Q15155 1222 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 SYPL2Q5VXT5 272 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 HIBCHQ6NVY1 386 aaPredicted RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 DARS2Q6PI48 645 aaKnown RBP16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 C1orf228Q6PIY5 440 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 HFE2Q6ZVN8 426 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 HOOK3Q86VS8 718 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 FAM131BQ86XD5 332 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 CCDC185Q8N715 623 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 PLD5Q8N7P1 536 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 FAF2Q96CS3 445 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 HIPK3Q9H422 1215 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 PNPLA8Q9NP80 782 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 NAALADL1Q9UQQ1 740 aa16.85■□□□□ 0.29
SNRNP35-204ENST00000527158 SYNJ2BP-COX16A0A087WUM0 186 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 OAZ2O95190 189 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 PARNO95453 639 aaKnown RBP16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 LTFP02788 710 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 NUDT17P0C025 328 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 NCAM1P13591 858 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 ROR1Q01973 937 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 GUCY1A3Q02108 690 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 NME3Q13232 169 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 SLC9A4Q6AI14 798 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 NPNTQ6UXI9 565 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 ANKRD33Q7Z3H0 272 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 PCGF5Q86SE9 256 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 DCP1BQ8IZD4 617 aaKnown RBP16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 PQLC3Q8N755 202 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 PCDH19Q8TAB3 1148 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 IRGQQ8WZA9 623 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 CCT8L2Q96SF2 557 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 RRN3Q9NYV6 651 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 COX16Q9P0S2 106 aa16.84■□□□□ 0.29
SNRNP35-204ENST00000527158 FZD10Q9ULW2 581 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms