RNA–Protein interactions for RNA: ENST00000527154.5

CHMP4A-203, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 571 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-203ENST00000527154 CAPN8A6NHC0 703 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 NEDD8-MDP1E9PL57 170 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 J3QKU1 62 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 PLK4O00444 970 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 KRT18P05783 430 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 GNL1P36915 607 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 UBA7P41226 1012 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 DGKGP49619 791 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 AFF3P51826 1226 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 COPAP53621 1224 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 DHRS13Q6UX07 377 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 Q6ZNB5 142 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 PAQR9Q6ZVX9 377 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 KRI1Q8N9T8 703 aaKnown RBP17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 SCAMP5Q8TAC9 235 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 DNAJC19Q96DA6 116 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 ANKRD36BP1Q96IX9 119 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 FCRL3Q96P31 734 aaPredicted RBP17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 ACCSQ96QU6 501 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 BBS2Q9BXC9 721 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 DPEP3Q9H4B8 488 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 GMIPQ9P107 970 aa17.2■□□□□ 0.34
CHMP4A-203ENST00000527154 KIAA0391O15091 583 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 STAU1O95793 577 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 IL12RB1P42701 662 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 GRIA4P48058 902 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 CSNK1EP49674 416 aaKnown RBP17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 PGFP49763 221 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 CASP5P51878 434 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 SLC5A3P53794 718 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 DUOXA2Q1HG44 320 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 TMPRSS6Q8IU80 811 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 ERLEC1Q96DZ1 483 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 ZSCAN31Q96LW9 406 aaPredicted RBP17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 KCNK16Q96T55 309 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 NUP58Q9BVL2 599 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 NRSN2Q9GZP1 204 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 MIR1-1HGQ9H1L0 117 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 CYLDQ9NQC7 956 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 SNX11Q9Y5W9 270 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 HECTD1Q9ULT8 2610 aa17.19■□□□□ 0.34
CHMP4A-203ENST00000527154 FRMD3A2A2Y4 597 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 GOLGA8IPA6NC78 632 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 GOLGA8JA6NMD2 632 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 CLDN5O00501 218 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 PENKP01210 267 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 LONP1P36776 959 aaKnown RBP17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 GRIN1Q05586 938 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 STARD3Q14849 445 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 HS2ST1Q7LGA3 356 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 DYMQ7RTS9 669 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 GPD1LQ8N335 351 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 B3GALNT2Q8NCR0 500 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 SIPA1Q96FS4 1042 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 WBP1Q96G27 269 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 ORAI3Q9BRQ5 295 aa17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 ZBTB32Q9Y2Y4 487 aaPredicted RBP17.18■□□□□ 0.34
CHMP4A-203ENST00000527154 TLR5O60602 858 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 CST3P01034 146 aaPredicted RBP17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 C1SP09871 688 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 CDK4P11802 303 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 GAP43P17677 238 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 CTSKP43235 329 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 CCT8P50990 548 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 MFAP3P55082 362 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 CFHR1Q03591 330 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 ORC1Q13415 861 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 ALCAMQ13740 583 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 SURF1Q15526 300 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 KLHDC10Q6PID8 442 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 TRAPPC11Q7Z392 1133 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 GPR155Q7Z3F1 870 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 WDR49Q8IV35 697 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 CACTIN-AS1Q8N1I8 211 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 SPRYD3Q8NCJ5 442 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 ZMIZ2Q8NF64 920 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 MRPL44Q9H9J2 332 aaKnown RBP17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 ANKRD6Q9Y2G4 727 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 PCDHB13Q9Y5F0 798 aa17.17■□□□□ 0.34
CHMP4A-203ENST00000527154 GOLGA8CPA6NN73 597 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 CAPN9O14815 690 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 TNNC2P02585 160 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 TLE3Q04726 772 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 IFRD2Q12894 506 aaPredicted RBP17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 LRRC69Q6ZNQ3 347 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 TPGS1Q6ZTW0 290 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 FAM35AQ86V20 835 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 ENGASEQ8NFI3 743 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 OR6B3Q8NGW1 331 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 MMS19Q96T76 1030 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 FGFBP2Q9BYJ0 223 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 SNX25Q9H3E2 840 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 CSNK1G1Q9HCP0 422 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 TM9SF3Q9HD45 589 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.16■□□□□ 0.341e-6■■■■■ 145.3
CHMP4A-203ENST00000527154 TMEM131Q92545 1883 aa17.16■□□□□ 0.34
CHMP4A-203ENST00000527154 NUMA1Q14980 2115 aa17.15■□□□□ 0.34
CHMP4A-203ENST00000527154 C10orf142B7Z368 130 aa17.15■□□□□ 0.34
CHMP4A-203ENST00000527154 H0Y8X5 98 aa17.15■□□□□ 0.34
CHMP4A-203ENST00000527154 ERVH48-1M5A8F1 160 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms