RNA–Protein interactions for RNA: ENST00000527133.2

CLNS1A-207, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-207ENST00000527133 SMYD3Q9H7B4 428 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 KIAA1586Q9HCI6 787 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 KRT82Q9NSB4 513 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 IL37Q9NZH6 218 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 MARK1Q9P0L2 795 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 USP36Q9P275 1121 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 LSM7Q9UK45 103 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 SMC3Q9UQE7 1217 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 NFE2L3Q9Y4A8 694 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 STON1Q9Y6Q2 735 aa13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 GOLGA4Q13439 2230 aaKnown RBP13.75□□□□□ -0.21
CLNS1A-207ENST00000527133 FAM92AA1XBS5 289 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 FAM149AA5PLN7 773 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 KCNJ18B7U540 433 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 BCAT2O15382 392 aaPredicted RBP13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 AP1G2O75843 785 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 CLSTN1O94985 981 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 CISD3P0C7P0 127 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 ZNF883P0CG24 379 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 HOXD13P35453 343 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 CDH8P55286 799 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 TRPC3Q13507 836 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 IL27RAQ6UWB1 636 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 CCDC73Q6ZRK6 1079 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 STXBP4Q6ZWJ1 553 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 METTL3Q86U44 580 aaKnown RBP13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 CCDC65Q8IXS2 484 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 CADM4Q8NFZ8 388 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 ADAM32Q8TC27 787 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 SMARCD1Q96GM5 515 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 CGRRF1Q99675 332 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 MKRN2Q9H000 416 aaKnown RBP13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 ITM2CQ9NQX7 267 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.74□□□□□ -0.214e-8■■■■□ 23.5
CLNS1A-207ENST00000527133 COMMD8Q9NX08 183 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 PLK2Q9NYY3 685 aa13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 SRPRBQ9Y5M8 271 aaKnown RBP13.74□□□□□ -0.21
CLNS1A-207ENST00000527133 FLRT2O43155 660 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 DKK1O94907 266 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 TPMTP51580 245 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 CYP2J2P51589 502 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 CYP24A1Q07973 514 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 GOLGA8FQ08AF8 430 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 GOLGA8DPQ0D2H9 430 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 PSMD6Q15008 389 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 RABEP1Q15276 862 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 CCDC157Q569K6 752 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 SCARA5Q6ZMJ2 495 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 CACUL1Q86Y37 369 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 FUKQ8N0W3 1084 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 GALNT15Q8N3T1 639 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 SYAP1Q96A49 352 aaPredicted RBP13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 XYLT2Q9H1B5 865 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 TLR8Q9NR97 1041 aaKnown RBP13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 EIF2B4Q9UI10 523 aaKnown RBP13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 BTBD3Q9Y2F9 522 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 PCDHGB2Q9Y5G2 931 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 KNL1Q8NG31 2342 aa13.73□□□□□ -0.21
CLNS1A-207ENST00000527133 A0A087WV48 116 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 A0A087X0B3 334 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 A0A1B0GVT2 93 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 METTL12A8MUP2 240 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 MDM4O15151 490 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 SYNCRIPO60506 623 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 PHACTR2O75167 634 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 BEST1O76090 585 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 CD2BP2O95400 341 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 STAU1O95793 577 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 PRB1P04280 392 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 CCDC130P13994 396 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 OXTRP30559 389 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 ATICP31939 592 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 ATP5C1P36542 298 aaKnown RBP13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 IL12RB1P42701 662 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 MAP3K7CLP57077 242 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 ACOT1Q86TX2 421 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 TMPRSS6Q8IU80 811 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 SCUBE3Q8IX30 993 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 ZMIZ2Q8NF64 920 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 SNX19Q92543 992 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 ZNF516Q92618 1163 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 ELMO3Q96BJ8 720 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 SIPA1Q96FS4 1042 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 P2RY11Q96G91 374 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 TNIP3Q96KP6 325 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 DCBLD2Q96PD2 775 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 SMOQ99835 787 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 FBXO44Q9H4M3 255 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 AGPAT3Q9NRZ7 376 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 OSER1Q9NX31 292 aa13.72□□□□□ -0.21
CLNS1A-207ENST00000527133 VPS37CA5D8V6 355 aaPredicted RBP13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 CLIC2O15247 247 aa13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 CYP26A1O43174 497 aa13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 NEFLP07196 543 aa13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 ACADMP11310 421 aa13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 CSNK1EP49674 416 aaKnown RBP13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 CEBPZQ03701 1054 aaKnown RBP13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 C19orf57Q0VDD7 668 aa13.71□□□□□ -0.21
CLNS1A-207ENST00000527133 ORC1Q13415 861 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms