RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 DHRS4L1P0CG22 281 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 ALADP13716 330 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 ETV4P43268 484 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 SLC18A2Q05940 514 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 BST2Q10589 180 aaKnown RBP18.25■□□□□ 0.51
USH1C-205ENST00000527020 FBXO47Q5MNV8 452 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 ERP27Q96DN0 273 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 BAIAP2L1Q9UHR4 511 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 UBQLN1Q9UMX0 589 aaKnown RBP18.25■□□□□ 0.51
USH1C-205ENST00000527020 ZNF236Q9UL36 1845 aa18.25■□□□□ 0.51
USH1C-205ENST00000527020 IQANK1A0A1B0GTG1 560 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 SMIM28A0A1B0GU29 152 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 A6NJR5 290 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 FAM155BO75949 473 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 LCP1P13796 627 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 BCAT1P54687 386 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 ZNF534Q76KX8 674 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 CCDC185Q8N715 623 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 PTPRN2Q92932 1015 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 KCTD15Q96SI1 283 aaPredicted RBP18.24■□□□□ 0.51
USH1C-205ENST00000527020 NCAPGQ9BPX3 1015 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 FRMD8Q9BZ67 464 aaPredicted RBP18.24■□□□□ 0.51
USH1C-205ENST00000527020 KLC2Q9H0B6 622 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 VPS11Q9H270 941 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 RNF39Q9H2S5 420 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 KLK14Q9P0G3 267 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 GTF2IRD1Q9UHL9 959 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 NRCAMQ92823 1304 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 SMIM35A0A1B0GVV1 85 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 CXorf49A8MYA2 514 aaPredicted RBP18.24■□□□□ 0.51
USH1C-205ENST00000527020 DYNC1LI2O43237 492 aaPredicted RBP18.24■□□□□ 0.51
USH1C-205ENST00000527020 METTL18O95568 372 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 APRTP07741 180 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 CYP2C9P11712 490 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 SCNN1AP37088 669 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 MAGEA3P43357 314 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 SNX16P57768 344 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 SOX4Q06945 474 aaPredicted RBP18.24■□□□□ 0.51
USH1C-205ENST00000527020 PLEKHG4Q58EX7 1191 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 PRAMEF19Q5SWL8 479 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 ARCQ7LC44 396 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 LIMS2Q7Z4I7 341 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 PLEKHH3Q7Z736 793 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 UPF1Q92900 1129 aaKnown RBP eCLIP18.24■□□□□ 0.51
USH1C-205ENST00000527020 APOPT1Q96IL0 206 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 DHX35Q9H5Z1 703 aaKnown RBP18.24■□□□□ 0.51
USH1C-205ENST00000527020 GDAP2Q9NXN4 497 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 SLC5A4Q9NY91 659 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 KANSL3Q9P2N6 904 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 AP4E1Q9UPM8 1137 aa18.24■□□□□ 0.51
USH1C-205ENST00000527020 KPNA7A9QM74 516 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 INHBAP08476 426 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 GNL1P36915 607 aaPredicted RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 ADAM17P78536 824 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 CDC42EP1Q00587 391 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 SLC45A4Q5BKX6 768 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 WLSQ5T9L3 541 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 CCDC33Q8N5R6 958 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 MCUQ8NE86 351 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 SYT17Q9BSW7 474 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 GOLGA2P5Q9HBQ8 144 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 SMYD2Q9NRG4 433 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 ZC3H7BQ9UGR2 993 aaKnown RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 GNEQ9Y223 722 aaKnown RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 MFHAS1Q9Y4C4 1052 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 MYO18AQ92614 2054 aaKnown RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 SLC15A5A6NIM6 579 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 UNCXA6NJT0 531 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 A8MUI8 341 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 LPXNO60711 386 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 GCATO75600 419 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 PYGBP11216 843 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 PRKCHP24723 683 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 TKTP29401 623 aaKnown RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 PREPLQ4J6C6 727 aaPredicted RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 XKR4Q5GH76 650 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 UBXN11Q5T124 520 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 SLC26A11Q86WA9 606 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 CDKL3Q8IVW4 592 aaPredicted RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 SLC2A14Q8TDB8 520 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 DNAJB3Q8WWF6 145 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 CSPG4P5Q96PW8 444 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 LRRC37BQ96QE4 947 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 PTPN18Q99952 460 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 TRIM6Q9C030 488 aaPredicted RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 ALG13Q9NP73 1137 aaKnown RBP18.23■□□□□ 0.51
USH1C-205ENST00000527020 USP3Q9Y6I4 520 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 NUMBLQ9Y6R0 609 aa18.23■□□□□ 0.51
USH1C-205ENST00000527020 DESP17661 470 aa18.22■□□□□ 0.51
USH1C-205ENST00000527020 SNX17Q15036 470 aa18.22■□□□□ 0.51
USH1C-205ENST00000527020 SETDB1Q15047 1291 aa18.22■□□□□ 0.51
USH1C-205ENST00000527020 PCBP1Q15365 356 aaKnown RBP eCLIP18.22■□□□□ 0.51
USH1C-205ENST00000527020 SEPT7Q16181 437 aaKnown RBP18.22■□□□□ 0.51
USH1C-205ENST00000527020 UTP4Q969X6 686 aaKnown RBP18.22■□□□□ 0.51
USH1C-205ENST00000527020 LENG1Q96BZ8 264 aaPredicted RBP18.22■□□□□ 0.51
USH1C-205ENST00000527020 QKIQ96PU8 341 aaKnown RBP eCLIP18.22■□□□□ 0.51
USH1C-205ENST00000527020 TRIM56Q9BRZ2 755 aaKnown RBP18.22■□□□□ 0.51
USH1C-205ENST00000527020 NPHS2Q9NP85 383 aa18.22■□□□□ 0.51
USH1C-205ENST00000527020 PIN4Q9Y237 131 aaKnown RBP18.22■□□□□ 0.51
USH1C-205ENST00000527020 IKBKGQ9Y6K9 419 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms