RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 MAGEA3P43357 314 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 RGS7P49802 495 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 BCAR1P56945 870 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 SESN3P58005 492 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 GOLGA7BQ2TAP0 167 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 C11orf91Q3C1V1 193 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 SLC10A6Q3KNW5 377 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 SCYL2Q6P3W7 929 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 OLFML1Q6UWY5 402 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 FBXO16Q8IX29 292 aaPredicted RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 CCDC110Q8TBZ0 833 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 FAM172AQ8WUF8 416 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 WDR60Q8WVS4 1066 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 TEKT4Q8WW24 435 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 NRG4Q8WWG1 115 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 MCUR1Q96AQ8 359 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 CPB2Q96IY4 423 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 ZNF333Q96JL9 665 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 MMADHCQ9H3L0 296 aaPredicted RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 NGRNQ9NPE2 291 aaKnown RBP12.1□□□□□ -0.47
LINC01001-201ENST00000526704 KCNK4Q9NYG8 393 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 SIRPGQ9P1W8 387 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 ZFATQ9P243 1243 aa12.1□□□□□ -0.47
LINC01001-201ENST00000526704 CAPN14A8MX76 684 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 I3L4J1 428 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 TRDMT1O14717 391 aaKnown RBP12.09□□□□□ -0.47
LINC01001-201ENST00000526704 GCKP35557 465 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 OCRLQ01968 901 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 TMEM132DQ14C87 1099 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 FAM187BQ17R55 369 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 TSNAXIP1Q2TAA8 658 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 TREML1Q86YW5 311 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 MAP7D3Q8IWC1 876 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 PPP1R16BQ96T49 567 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 STOML1Q9UBI4 398 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 HMX2A2RU54 273 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 CYB561D2O14569 222 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 NVLO15381 856 aaKnown RBP12.09□□□□□ -0.47
LINC01001-201ENST00000526704 HBP1O60381 514 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 PSMG1O95456 288 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 VHLP40337 213 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 PHKA2P46019 1235 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 TMPRSS15P98073 1019 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 TNFAIP2Q03169 654 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 CHI3L2Q15782 390 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 MUM1Q2TAK8 710 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 BOLA3Q53S33 107 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 TRMT10BQ6PF06 316 aaKnown RBP12.09□□□□□ -0.47
LINC01001-201ENST00000526704 VPS52Q8N1B4 723 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 MPP5Q8N3R9 675 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 MCUQ8NE86 351 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 FBXO27Q8NI29 283 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 E2F7Q96AV8 911 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 ASB7Q9H672 318 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 ZNF395Q9H8N7 513 aaPredicted RBP12.09□□□□□ -0.47
LINC01001-201ENST00000526704 PCMTD2Q9NV79 361 aa12.09□□□□□ -0.47
LINC01001-201ENST00000526704 FAM159BA6NKW6 160 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 METTL18O95568 372 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 LINGO3P0C6S8 592 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 CPA2P48052 419 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 SLC26A2P50443 739 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 PMF1Q6P1K2 205 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 ARID3BQ8IVW6 561 aaPredicted RBP12.08□□□□□ -0.48
LINC01001-201ENST00000526704 TRIM42Q8IWZ5 723 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 APBB2Q92870 758 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 KHSRPQ92945 711 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC01001-201ENST00000526704 LRRC39Q96DD0 335 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 SIGLEC10Q96LC7 697 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 ZNF670Q9BS34 389 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 SLC13A1Q9BZW2 595 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 SMARCAD1Q9H4L7 1026 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 PPP2R3BQ9Y5P8 575 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 A0A087WZ62 844 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 MDM4O15151 490 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 PDHA1P08559 390 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 GSTA2P09210 222 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 IGBP1P78318 339 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 CCDC6Q16204 474 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 PKDCCQ504Y2 493 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 PPP1R26Q5T8A7 1209 aaPredicted RBP12.08□□□□□ -0.48
LINC01001-201ENST00000526704 SNX30Q5VWJ9 437 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 ATG16L1Q676U5 607 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 GADL1Q6ZQY3 521 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 TTC30AQ86WT1 665 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 LMNTD2Q8IXW0 634 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 GSDMBQ8TAX9 411 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 SLC16A10Q8TF71 515 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 ACAP3Q96P50 834 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 TBCBQ99426 244 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 LBHD1Q9BQE6 289 aaPredicted RBP12.08□□□□□ -0.48
LINC01001-201ENST00000526704 FDXACB1Q9BRP7 624 aaPredicted RBP12.08□□□□□ -0.48
LINC01001-201ENST00000526704 NT5C1AQ9BXI3 368 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 MIS12Q9H081 205 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 RNPEPQ9H4A4 650 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 NRDE2Q9H7Z3 1164 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 SDAD1Q9NVU7 687 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINC01001-201ENST00000526704 ITGA11Q9UKX5 1188 aa12.08□□□□□ -0.48
LINC01001-201ENST00000526704 LTBP3Q9NS15 1303 aa12.07□□□□□ -0.48
LINC01001-201ENST00000526704 CAPN9O14815 690 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms