RNA–Protein interactions for RNA: ENST00000526545.5

AMBRA1-204, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 837 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-204ENST00000526545 APOBEC3GQ9HC16 384 aaKnown RBP11.7□□□□□ -0.54
AMBRA1-204ENST00000526545 METTL14Q9HCE5 456 aaKnown RBP11.7□□□□□ -0.54
AMBRA1-204ENST00000526545 DNMT3LQ9UJW3 386 aa11.7□□□□□ -0.54
AMBRA1-204ENST00000526545 INVSQ9Y283 1065 aa11.7□□□□□ -0.54
AMBRA1-204ENST00000526545 NCOR2Q9Y618 2525 aa11.7□□□□□ -0.54
AMBRA1-204ENST00000526545 RALGAPA1Q6GYQ0 2036 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 EML5Q05BV3 1969 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 SLC16A3O15427 465 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 CYP26A1O43174 497 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 MAP3K13O43283 966 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 CACNG3O60359 315 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 ADAM23O75077 832 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 LETM1O95202 739 aaPredicted RBP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 GNA14O95837 355 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 TBX18O95935 607 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 TRIM49P0CI25 452 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 TRIM49CP0CI26 452 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 IRF1P10914 325 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 CD44P16070 742 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 PGFP49763 221 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 KIF11P52732 1056 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 C10orf76Q5T2E6 689 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 DAB2IPQ5VWQ8 1189 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 SDE2Q6IQ49 451 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 SASS6Q6UVJ0 657 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 RBM43Q6ZSC3 357 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 CCDC186Q7Z3E2 898 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 CYP2U1Q7Z449 544 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 TTC30AQ86WT1 665 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 ZC3H3Q8IXZ2 948 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 ZNF513Q8N8E2 541 aaPredicted RBP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 FBXL13Q8NEE6 735 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 HEXIM2Q96MH2 286 aaKnown RBP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 TWNKQ96RR1 684 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 EDEM2Q9BV94 578 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 SMOC1Q9H4F8 434 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 CLIC5Q9NZA1 410 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 MARK1Q9P0L2 795 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 BCCIPQ9P287 314 aaKnown RBP eCLIP11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 RWDD2AQ9UIY3 292 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 ZNF510Q9Y2H8 683 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 USP3Q9Y6I4 520 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 MYO16Q9Y6X6 1858 aa11.69□□□□□ -0.54
AMBRA1-204ENST00000526545 A0A1W2PQH9 124 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 LNP1A1A4G5 178 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 ANTXRLA6NF34 631 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 ZBTB24O43167 697 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 RALAP11233 206 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 RARGP13631 454 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 TYRP14679 529 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 HNRNPLP14866 589 aaKnown RBP eCLIP11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 CD58P19256 250 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 BCKDHBP21953 392 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 ERCC5P28715 1186 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 NTSR1P30989 418 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 SLC8A3P57103 927 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 C10orf120Q5SQS8 335 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 PPP1R26Q5T8A7 1209 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 GRAMD4Q6IC98 578 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 TTI2Q6NXR4 508 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 GPRIN1Q7Z2K8 1008 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 PGBD3Q8N328 593 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 ARHGAP18Q8N392 663 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 HMGB4Q8WW32 186 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 TMEM176AQ96HP8 235 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 BBS2Q9BXC9 721 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 DNAJC17Q9NVM6 304 aaKnown RBP11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 OSER1Q9NX31 292 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 RAB20Q9NX57 234 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 ARMCX3Q9UH62 379 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 EVLQ9UI08 416 aaPredicted RBP11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 NAGPAQ9UK23 515 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 CTNND2Q9UQB3 1225 aa11.68□□□□□ -0.54
AMBRA1-204ENST00000526545 TCRBV21S2A2A0A5A6 115 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 TRIM49BA6NDI0 452 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 C4orf47A7E2U8 309 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 NEDD8-MDP1E9PL57 170 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 AP5Z1O43299 807 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 ZNF217O75362 1048 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 KCNK5O95279 499 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 HOXD12P35452 270 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 CHKAP35790 457 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 DHPSP49366 369 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 MXI1P50539 228 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 COG7P83436 770 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 SHC2P98077 582 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 LMAN2Q12907 356 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 E2F5Q15329 346 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 TPD52L1Q16890 204 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 KLHL40Q2TBA0 621 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 MAP7D1Q3KQU3 841 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 N4BP2L1Q5TBK1 243 aaPredicted RBP11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 TCEAL6Q6IPX3 200 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 SLC36A4Q6YBV0 504 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 SYT12Q8IV01 421 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 RLN3Q8WXF3 142 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 TCEAL3Q969E4 200 aa11.67□□□□□ -0.54
AMBRA1-204ENST00000526545 WBP2Q969T9 261 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms