RNA–Protein interactions for RNA: ENST00000526433.1

SSSCA1-202, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3

Gene SSSCA1, Length 739 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-202ENST00000526433 CACNA1IQ9P0X4 2223 aa17■□□□□ 0.31
SSSCA1-202ENST00000526433 GALR2O43603 387 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 GREM1O60565 184 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 JAM2P57087 298 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 COG7P83436 770 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 DHCR24Q15392 516 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 RHBDF2Q6PJF5 856 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 BBS7Q8IWZ6 715 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 RNF139Q8WU17 664 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 OTUB2Q96DC9 234 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 CHFRQ96EP1 664 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 NAP1L5Q96NT1 182 aaPredicted RBP16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 PDCL3Q9H2J4 239 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 OLA1Q9NTK5 396 aaKnown RBP16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 MARCH2Q9P0N8 246 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 STRIP2Q9ULQ0 834 aa16.99■□□□□ 0.31
SSSCA1-202ENST00000526433 ATG2BQ96BY7 2078 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 SLC12A8A0AV02 714 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 E5RJQ4 531 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 TRDMT1O14717 391 aaKnown RBP16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 PAPSS1O43252 624 aaPredicted RBP16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 STC2O76061 302 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 GFPT2O94808 682 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 LTFP02788 710 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 HMBSP08397 361 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 CHRNB1P11230 501 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 SOX5P35711 763 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 STAT1P42224 750 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 GALK1P51570 392 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 TPM4P67936 248 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 PDCLQ13371 301 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 TAF3Q5VWG9 929 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 PRSS33Q8NF86 280 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 DDX1Q92499 740 aaKnown RBP16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 GOLGA1Q92805 767 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 PPP1R13BQ96KQ4 1090 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 SPAG5Q96R06 1193 aa16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 LSM7Q9UK45 103 aaKnown RBP16.98■□□□□ 0.31
SSSCA1-202ENST00000526433 A0A1B0GTH6 734 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 SART1O43290 800 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 SERPINC1P01008 464 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 CYP17A1P05093 508 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 MAGEA9P43362 315 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 RPS9P46781 194 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 NR1I3Q14994 352 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 NOP9Q86U38 636 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 C1orf131Q8NDD1 294 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 NOX5Q96PH1 765 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 CPXM1Q96SM3 734 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 FBRSL1Q9HCM7 1045 aaKnown RBP16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 TJP2Q9UDY2 1190 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 SFMBT1Q9UHJ3 866 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 ARIH1Q9Y4X5 557 aaPredicted RBP16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 CEP83Q9Y592 693 aa16.97■□□□□ 0.31
SSSCA1-202ENST00000526433 GOLGA6L19H0YKK7 550 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 KLKB1P03952 638 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 FYNP06241 537 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 FANCCQ00597 558 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 GAB4Q2WGN9 574 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 TMEM196Q5HYL7 178 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 DGKKQ5KSL6 1271 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 LY6G5CQ5SRR4 150 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 NAIF1Q69YI7 327 aaPredicted RBP16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 MSANTD2Q6P1R3 559 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 FMNL3Q8IVF7 1028 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 TMEM35BQ8NCS4 154 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 EPS8L1Q8TE68 723 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 EXOC4Q96A65 974 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 FAM149B1Q96BN6 582 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 P2RY13Q9BPV8 354 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 DCLK3Q9C098 648 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 RBM12Q9NTZ6 932 aaKnown RBP16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 CACNA1HO95180 2353 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 WDFY4Q6ZS81 3184 aa16.96■□□□□ 0.31
SSSCA1-202ENST00000526433 ADH1CP00326 375 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 MMEP08473 750 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 CDH5P33151 784 aaPredicted RBP16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 OPRD1P41143 372 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 SLC6A11P48066 632 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 SNX16P57768 344 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 GAD2Q05329 585 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 GRSF1Q12849 480 aaKnown RBP eCLIP16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 TCF15Q12870 199 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 LRRC32Q14392 662 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 FSTL4Q6MZW2 842 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 Q6ZNB5 142 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 CACNA2D4Q7Z3S7 1137 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 TMEM25Q86YD3 366 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 C1orf210Q8IVY1 113 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 CD101Q93033 1021 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 CHRDQ9H2X0 955 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 SPHK2Q9NRA0 654 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 SPATA6Q9NWH7 488 aaPredicted RBP16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 NAALADL1Q9UQQ1 740 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 ZNF510Q9Y2H8 683 aa16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 HBS1LQ9Y450 684 aaKnown RBP16.95■□□□□ 0.3
SSSCA1-202ENST00000526433 A0A1W2PQC6 194 aa16.94■□□□□ 0.3
SSSCA1-202ENST00000526433 H0Y858 1186 aa16.94■□□□□ 0.3
SSSCA1-202ENST00000526433 ADH5P11766 374 aa16.94■□□□□ 0.3
SSSCA1-202ENST00000526433 NCAM1P13591 858 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms