RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 TUBGCP2Q9BSJ2 902 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 MMRN2Q9H8L6 949 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 ECT2Q9H8V3 914 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 SIX2Q9NPC8 291 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 FSCN3Q9NQT6 498 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 TDP1Q9NUW8 608 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 RAB20Q9NX57 234 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 L1RE1Q9UN81 338 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 CCL26Q9Y258 94 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 TP53BP1Q12888 1972 aaPredicted RBP11.59□□□□□ -0.55
NEDD8-204ENST00000526430 TMEM131Q92545 1883 aa11.59□□□□□ -0.55
NEDD8-204ENST00000526430 TEX15Q9BXT5 2789 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 KNL1Q8NG31 2342 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 MYH10P35580 1976 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 MTMR11A4FU01 709 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 E9PAM4 449 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 TULP1O00294 542 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-204ENST00000526430 CYB561D2O14569 222 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 AP5Z1O43299 807 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 CBFA2T3O75081 653 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 SLC9A1P19634 815 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 EEF1GP26641 437 aaKnown RBP11.58□□□□□ -0.56
NEDD8-204ENST00000526430 ATICP31939 592 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 CDH8P55286 799 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 CYP4F3Q08477 520 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 CAMK2BQ13554 666 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 MAN2A1Q16706 1144 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 SGSM1Q2NKQ1 1148 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 MAP7D1Q3KQU3 841 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 TCERG1LQ5VWI1 586 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 WSCD1Q658N2 575 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 PDCL2Q8N4E4 241 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 UBR7Q8N806 425 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 FBXL13Q8NEE6 735 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 RIN3Q8TB24 985 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 PIP4K2CQ8TBX8 421 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 RLN3Q8WXF3 142 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 ATP2A3Q93084 1043 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 NAP1L5Q96NT1 182 aaPredicted RBP11.58□□□□□ -0.56
NEDD8-204ENST00000526430 HNRNPABQ99729 332 aaKnown RBP11.58□□□□□ -0.56
NEDD8-204ENST00000526430 NAT10Q9H0A0 1025 aaKnown RBP11.58□□□□□ -0.56
NEDD8-204ENST00000526430 RBSNQ9H1K0 784 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 NDST4Q9H3R1 872 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 TSPY26PQ9H489 355 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.58□□□□□ -0.56
NEDD8-204ENST00000526430 TAB2Q9NYJ8 693 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 SNX9Q9Y5X1 595 aa11.58□□□□□ -0.56
NEDD8-204ENST00000526430 TRABD2BA6NFA1 517 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 SMTNL1A8MU46 457 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 K7EQS6 105 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 P4HA2O15460 535 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 TEX33O43247 280 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 AFPP02771 609 aaKnown RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 OR4Q2P0C623 313 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 TYMPP19971 482 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 PAX3P23760 479 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 LMO2P25791 158 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 PON1P27169 355 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 PNPLA4P41247 253 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 ASPAP45381 313 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 MTIF2P46199 727 aaKnown RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 MXI1P50539 228 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 COPB1P53618 953 aaKnown RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 MRPS21P82921 87 aaKnown RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 BIRC3Q13489 604 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 VEPH1Q14D04 833 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 TPD52L1Q16890 204 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 SV2CQ496J9 727 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 HSF5Q4G112 596 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 C2orf27AQ580R0 203 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 TMEM92Q6UXU6 159 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 DPH6Q7L8W6 267 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 LRRTM3Q86VH5 581 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 CREBRFQ8IUR6 639 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 FAM114A1Q8IWE2 563 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 GALNT15Q8N3T1 639 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 TTC9BQ8N6N2 239 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 OR2I1PQ8NGU4 316 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 OR10T2Q8NGX3 314 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 KAT5Q92993 513 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 PKMYT1Q99640 499 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 MRPL45Q9BRJ2 306 aaKnown RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 CRACR2AQ9BSW2 395 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 VPS16Q9H269 839 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 AJAP1Q9UKB5 411 aaPredicted RBP11.57□□□□□ -0.56
NEDD8-204ENST00000526430 PCOLCE2Q9UKZ9 415 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 SLC27A5Q9Y2P5 690 aa11.57□□□□□ -0.56
NEDD8-204ENST00000526430 COL12A1Q99715 3063 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 COL5A1P20908 1838 aaPredicted RBP11.56□□□□□ -0.56
NEDD8-204ENST00000526430 DOPEY2Q9Y3R5 2298 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 TEX51A0A1B0GUA7 166 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 STX10O60499 249 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 PHACTR2O75167 634 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 TACC1O75410 805 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 FAM163BP0C2L3 166 aa11.56□□□□□ -0.56
NEDD8-204ENST00000526430 HNRNPLP14866 589 aaKnown RBP eCLIP11.56□□□□□ -0.56
NEDD8-204ENST00000526430 TUFMP49411 452 aaKnown RBP11.56□□□□□ -0.56
NEDD8-204ENST00000526430 CFHR1Q03591 330 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms