RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 MYL5Q02045 173 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 GAD2Q05329 585 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 LRMPQ12912 555 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 NFKBIBQ15653 356 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 MAN2A1Q16706 1144 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 ANO6Q4KMQ2 910 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 TCP11X2Q5H9J9 407 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 CDKAL1Q5VV42 579 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 BHLHA9Q7RTU4 235 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 PIGZQ86VD9 579 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 IL17RCQ8NAC3 791 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 ANKRD52Q8NB46 1076 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 OTUB2Q96DC9 234 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 ZC3H10Q96K80 434 aaKnown RBP13.19□□□□□ -0.3
SMCO4-202ENST00000525141 ZSWIM1Q9BR11 485 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 TUBGCP2Q9BSJ2 902 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 FUCA2Q9BTY2 467 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 DNAI2Q9GZS0 605 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 DUSP15Q9H1R2 295 aaPredicted RBP13.19□□□□□ -0.3
SMCO4-202ENST00000525141 ZDHHC4Q9NPG8 344 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 SPHK2Q9NRA0 654 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 SEMA4GQ9NTN9 838 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 INVSQ9Y283 1065 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 SH3BP1Q9Y3L3 701 aa13.19□□□□□ -0.3
SMCO4-202ENST00000525141 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.19□□□□□ -0.3
SMCO4-202ENST00000525141 SYCE3A1L190 88 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 KCNJ18B7U540 433 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 SGK1O00141 431 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 HOXC11O43248 304 aaPredicted RBP13.18□□□□□ -0.3
SMCO4-202ENST00000525141 GDF9O60383 454 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 ADAM23O75077 832 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 TULP3O75386 442 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 RPP40O75818 363 aaKnown RBP13.18□□□□□ -0.3
SMCO4-202ENST00000525141 CALCAP01258 141 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 TIE1P35590 1138 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 EIF2DP41214 584 aaKnown RBP13.18□□□□□ -0.3
SMCO4-202ENST00000525141 GRIA2P42262 883 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 TNFRSF4P43489 277 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 PLA2G4AP47712 749 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 MRPS21P82921 87 aaKnown RBP13.18□□□□□ -0.3
SMCO4-202ENST00000525141 CUL2Q13617 745 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 KCNJ12Q14500 433 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 PUM1Q14671 1186 aaKnown RBP eCLIP13.18□□□□□ -0.3
SMCO4-202ENST00000525141 PKDCCQ504Y2 493 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 PM20D1Q6GTS8 502 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 KLHDC10Q6PID8 442 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 Q6ZNB5 142 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 CEP68Q76N32 757 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 CCDC186Q7Z3E2 898 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 CACNA2D4Q7Z3S7 1137 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 RASSF3Q86WH2 238 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 ALLCQ8N6M5 410 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 TFAP2BQ92481 460 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 KAT5Q92993 513 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 EXOC4Q96A65 974 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 NDST4Q9H3R1 872 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 FANCLQ9NW38 375 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 GMEB2Q9UKD1 530 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 RAB23Q9ULC3 237 aa13.18□□□□□ -0.3
SMCO4-202ENST00000525141 LRRC10BA6NIK2 292 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 SMTNL1A8MU46 457 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 STC2O76061 302 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 CAVIN2O95810 425 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 ADH1CP00326 375 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 TRIM21P19474 475 aaKnown RBP13.17□□□□□ -0.3
SMCO4-202ENST00000525141 TBXAS1P24557 533 aaPredicted RBP13.17□□□□□ -0.3
SMCO4-202ENST00000525141 PDE4CQ08493 712 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 NCAPHQ15003 741 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 CCDC6Q16204 474 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 CRY1Q16526 586 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 CSRP2Q16527 193 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 ZSCAN23Q3MJ62 389 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 PLK5Q496M5 336 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 VWA3BQ502W6 1294 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 SMYD5Q6GMV2 418 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 ERMP1Q7Z2K6 904 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 MIB1Q86YT6 1006 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 FRMD1Q8N878 549 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 TXNDC5Q8NBS9 432 aaKnown RBP13.17□□□□□ -0.3
SMCO4-202ENST00000525141 UBA3Q8TBC4 463 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 SECISBP2LQ93073 1101 aaKnown RBP13.17□□□□□ -0.3
SMCO4-202ENST00000525141 NT5C1BQ96P26 610 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 ARRDC1-AS1Q9H2J1 176 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 ARHGEF4Q9NR80 690 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 RXFP3Q9NSD7 469 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 CLIC5Q9NZA1 410 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 NAGPAQ9UK23 515 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 FBXO10Q9UK96 956 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 MMP17Q9ULZ9 603 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 USP18Q9UMW8 372 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 GON4LQ3T8J9 2241 aa13.17□□□□□ -0.3
SMCO4-202ENST00000525141 SPTBN2O15020 2390 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 MED19A0JLT2 244 aaPredicted RBP13.16□□□□□ -0.3
SMCO4-202ENST00000525141 PRRT4C9JH25 899 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 LRP3O75074 770 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 KLF8O95600 359 aaPredicted RBP13.16□□□□□ -0.3
SMCO4-202ENST00000525141 APBB3O95704 486 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 APODP05090 189 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 ZNF165P49910 485 aa13.16□□□□□ -0.3
SMCO4-202ENST00000525141 YWHAEP62258 255 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms