RNA–Protein interactions for RNA: ENST00000524481.5

PTPRK-216, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 3,157 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-216ENST00000524481 FNBP1LQ5T0N5 605 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 KCNT2Q6UVM3 1135 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 TMCO2Q7Z6W1 182 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 TMEM110Q86TL2 294 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 PDIK1LQ8N165 341 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 PLD5Q8N7P1 536 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 DBF4BQ8NFT6 615 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 KHSRPQ92945 711 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■■□□□ 14.1
PTPRK-216ENST00000524481 APOL2Q9BQE5 337 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 SLC4A5Q9BY07 1137 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 IKBKGQ9Y6K9 419 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 E2F8A0AVK6 867 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 DNALI1O14645 258 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 CEP290O15078 2479 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 KPNA6O60684 536 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 KCNE1P15382 129 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 EIF3BP55884 814 aaKnown RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 SESN2P58004 480 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 MCCD1P59942 119 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 MSS51Q4VC12 460 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 SLC39A12Q504Y0 691 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 LRRC38Q5VT99 294 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 BBS12Q6ZW61 710 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 TTC13Q8NBP0 860 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 FBXO36Q8NEA4 188 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 CMASQ8NFW8 434 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.22□□□□□ -0.456e-7■■□□□ 14
PTPRK-216ENST00000524481 SEC14L1Q92503 715 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 MYLPFQ96A32 169 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 PPP1R10Q96QC0 940 aaKnown RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 CALCOCO1Q9P1Z2 691 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 SFMBT1Q9UHJ3 866 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 EIF3HO15372 352 aaKnown RBP eCLIP12.22□□□□□ -0.452e-6■□□□□ 10.9
PTPRK-216ENST00000524481 F7P08709 466 aaPredicted RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 CKBP12277 381 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 IFT88Q13099 833 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 AUHQ13825 339 aaKnown RBP12.22□□□□□ -0.45
PTPRK-216ENST00000524481 FAM47EQ6ZV65 393 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 KCNN1Q92952 543 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 RNF208Q9H0X6 261 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 ADAM7Q9H2U9 754 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 TMLHEQ9NVH6 421 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 LRFN2Q9ULH4 789 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 DERAQ9Y315 318 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 Q9Y3F1 56 aa12.22□□□□□ -0.45
PTPRK-216ENST00000524481 APOC4-APOC2K7ER74 178 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 TP73O15350 636 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 MSI1O43347 362 aaKnown RBP12.21□□□□□ -0.45
PTPRK-216ENST00000524481 APOC2P02655 101 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 GRK4P32298 578 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 GBP1P32455 592 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 GRIA1P42261 906 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 OLIG2Q13516 323 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 MTFR1Q15390 333 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 EFHC1Q5JVL4 640 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 HEATR6Q6AI08 1181 aaKnown RBP12.21□□□□□ -0.45
PTPRK-216ENST00000524481 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 DENND5BQ6ZUT9 1274 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 PAQR9Q6ZVX9 377 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 FAM35AQ86V20 835 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 LRRTM3Q86VH5 581 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 SPATA2LQ8IUW3 424 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-216ENST00000524481 CRYBG2Q8N1P7 616 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 C12orf50Q8NA57 414 aaPredicted RBP12.21□□□□□ -0.45
PTPRK-216ENST00000524481 ATAD1Q8NBU5 361 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 IL1RAPL1Q9NZN1 696 aa12.21□□□□□ -0.45
PTPRK-216ENST00000524481 C3orf70A6NLC5 250 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-216ENST00000524481 TOMM70O94826 608 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 IRX4P78413 519 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 MRPS5P82675 430 aaKnown RBP12.21□□□□□ -0.46
PTPRK-216ENST00000524481 YWHAHQ04917 246 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-216ENST00000524481 CES3Q6UWW8 571 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 ARHGEF18Q6ZSZ5 1173 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 PID1Q7Z2X4 250 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 MIB1Q86YT6 1006 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 BBOF1Q8ND07 529 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 ZNF296Q8WUU4 475 aaPredicted RBP12.21□□□□□ -0.46
PTPRK-216ENST00000524481 CCT8L2Q96SF2 557 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 SMOQ99835 787 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 PIGVQ9NUD9 493 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 LCMT1Q9UIC8 334 aa12.21□□□□□ -0.46
PTPRK-216ENST00000524481 TMEM120BA0PK00 339 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 NEBLO76041 1014 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 KLRC2P26717 231 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 EPHB2P29323 1055 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 COPS2P61201 443 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 OASLQ15646 514 aaKnown RBP12.2□□□□□ -0.46
PTPRK-216ENST00000524481 FAM171A1Q5VUB5 890 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 POLNQ7Z5Q5 900 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 CPT1BQ92523 772 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 NRDE2Q9H7Z3 1164 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 STAP1Q9ULZ2 295 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 A0A0U1RQF3 1178 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 FAM72CH0Y354 149 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 DDHD2O94830 711 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 TMEM63AO94886 807 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 SETSIPP0DME0 302 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 ODC1P11926 461 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 CPB1P15086 417 aa12.2□□□□□ -0.46
PTPRK-216ENST00000524481 ELK3P41970 407 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms