RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 MESP2Q0VG99 397 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 TAF5Q15542 800 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 TRIP4Q15650 581 aaPredicted RBP12.52□□□□□ -0.41
CLN8-207ENST00000524258 E4F1Q66K89 784 aaPredicted RBP12.52□□□□□ -0.41
CLN8-207ENST00000524258 ZNF852Q6ZMS4 543 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 C1orf131Q8NDD1 294 aaKnown RBP12.52□□□□□ -0.41
CLN8-207ENST00000524258 NEK11Q8NG66 645 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 CSGALNACT1Q8TDX6 532 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 FAM3CQ92520 227 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 EDEM1Q92611 657 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 EZH1Q92800 747 aaPredicted RBP12.52□□□□□ -0.41
CLN8-207ENST00000524258 MSANTD3Q96H12 275 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 CDK5RAP1Q96SZ6 601 aaKnown RBP12.52□□□□□ -0.41
CLN8-207ENST00000524258 PCDHB18PQ96TA0 734 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 MIS12Q9H081 205 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 ABCC13Q9NSE7 274 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 SIT1Q9Y3P8 196 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 MYO16Q9Y6X6 1858 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 CACNA1IQ9P0X4 2223 aa12.52□□□□□ -0.41
CLN8-207ENST00000524258 TRDMT1O14717 391 aaKnown RBP12.51□□□□□ -0.41
CLN8-207ENST00000524258 IGLV3-25P01717 112 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 IGLV3-27P01718 113 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 DCNP07585 359 aaKnown RBP12.51□□□□□ -0.41
CLN8-207ENST00000524258 KRT9P35527 623 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 OPRD1P41143 372 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 STAT1P42224 750 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 IFNAR2P48551 515 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 NOMO3P69849 1222 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 PITX1P78337 314 aaPredicted RBP12.51□□□□□ -0.41
CLN8-207ENST00000524258 CDR2Q01850 454 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 EFEMP1Q12805 493 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 CCINQ13939 588 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 GAS6Q14393 721 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 DHCR24Q15392 516 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 TMEM196Q5HYL7 178 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 TAF3Q5VWG9 929 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 SYPL2Q5VXT5 272 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 CC2D1AQ6P1N0 951 aaPredicted RBP12.51□□□□□ -0.41
CLN8-207ENST00000524258 OLFML1Q6UWY5 402 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 SUGP1Q8IWZ8 645 aaKnown RBP12.51□□□□□ -0.41
CLN8-207ENST00000524258 FAM217AQ8IXS0 508 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 PRSS33Q8NF86 280 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 ATP2A3Q93084 1043 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 OTUB2Q96DC9 234 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 PPP1R13BQ96KQ4 1090 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 NELL2Q99435 816 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 MFSD1Q9H3U5 465 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 TSPY26PQ9H489 355 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 ST7Q9NRC1 585 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 MARCH2Q9P0N8 246 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 TBC1D14Q9P2M4 693 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 SFMBT1Q9UHJ3 866 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 MYO6Q9UM54 1294 aa12.51□□□□□ -0.41
CLN8-207ENST00000524258 SLC9A3R1O14745 358 aaPredicted RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 LSM8O95777 96 aaKnown RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 IRF1P10914 325 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 UNGP13051 313 aaPredicted RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 COL9A1P20849 921 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 RPS9P46781 194 aaKnown RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 GALK1P51570 392 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 KPNA1P52294 538 aaPredicted RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 NUBP1P53384 320 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 COG7P83436 770 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 TCF15Q12870 199 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 PTP4A2Q12974 167 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 UBXN2BQ14CS0 331 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 LY6G5CQ5SRR4 150 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 FSTL4Q6MZW2 842 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 FAM183BPQ6ZVS7 135 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 TADA2BQ86TJ2 420 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 C12orf40Q86WS4 652 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 TMEM25Q86YD3 366 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 MIB1Q86YT6 1006 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 ETFBKMTQ8IXQ9 262 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 MAML2Q8IZL2 1156 aaPredicted RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 PHTF2Q8N3S3 785 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 CPA6Q8N4T0 437 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 DTWD2Q8NBA8 298 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 TMEM35BQ8NCS4 154 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 TTC16Q8NEE8 873 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 ZNF397Q8NF99 534 aaPredicted RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 DQX1Q8TE96 717 aaKnown RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 SLC39A13Q96H72 371 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 SLC2A13Q96QE2 648 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 SPAG5Q96R06 1193 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 ADAM33Q9BZ11 813 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 OLA1Q9NTK5 396 aaKnown RBP12.5□□□□□ -0.41
CLN8-207ENST00000524258 ASNSD1Q9NWL6 643 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 RASAL2Q9UJF2 1139 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 STOML2Q9UJZ1 356 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 NAALADL1Q9UQQ1 740 aa12.5□□□□□ -0.41
CLN8-207ENST00000524258 A0A0A0MRY4 1105 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 SLC12A8A0AV02 714 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 ANTXRLA6NF34 631 aa12.49□□□□□ -0.41
CLN8-207ENST00000524258 HOXC11O43248 304 aaPredicted RBP12.49□□□□□ -0.41
CLN8-207ENST00000524258 SART1O43290 800 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms