RNA–Protein interactions for RNA: ENST00000523912.5

CTNNA1-240, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-240ENST00000523912 CACNG3O60359 315 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 CAVIN2O95810 425 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 TBX18O95935 607 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 HOXC13P31276 330 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 PRCPP42785 496 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 KIF11P52732 1056 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 BCAT1P54687 386 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 COG7P83436 770 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 CUL2Q13617 745 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 SF3A2Q15428 464 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 GOLGA7BQ2TAP0 167 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 N4BP2L1Q5TBK1 243 aaPredicted RBP9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 PMS2CLQ68D20 193 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 RNF43Q68DV7 783 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 ARHGAP17Q68EM7 881 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 TMEM25Q86YD3 366 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 MIB1Q86YT6 1006 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 NAT16Q8N8M0 369 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 IL17RCQ8NAC3 791 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 HMGB4Q8WW32 186 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 EEF2KMTQ96G04 330 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 TIGD1Q96MW7 591 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 IPO9Q96P70 1041 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 LSM14BQ9BX40 385 aaKnown RBP9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 UBXN6Q9BZV1 441 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 DCLK3Q9C098 648 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 LRRC4Q9HBW1 653 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 RASAL2Q9UJF2 1139 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 ANAPC1Q9H1A4 1944 aa9.32□□□□□ -0.92
CTNNA1-240ENST00000523912 HELZP42694 1942 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 BICDL2A1A5D9 508 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 BCLAF3A2AJT9 711 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 HHLA1C9JL84 531 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 SGK1O00141 431 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 KHNYNO15037 678 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 DCLK1O15075 740 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CYBBP04839 570 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 PROS1P07225 676 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 HOXB2P14652 356 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 TYRP14679 529 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CD19P15391 556 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CHKAP35790 457 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 KIR2DL1P43626 348 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 DHPSP49366 369 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 DGKGP49619 791 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 MCCD1P59942 119 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CCDC6Q16204 474 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CCDC40Q4G0X9 1142 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 SGO2Q562F6 1265 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 STPG1Q5TH74 334 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 TPGS1Q6ZTW0 290 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CHPFQ8IZ52 775 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 SIX6OS1Q8N1H7 587 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 PHTF2Q8N3S3 785 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 ZNF276Q8N554 614 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 ANKRD52Q8NB46 1076 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 SLC4A11Q8NBS3 891 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 UCMAQ8WVF2 138 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 SEMA4DQ92854 862 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 DHTKD1Q96HY7 919 aaPredicted RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CEP63Q96MT8 703 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 ARID3AQ99856 593 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 EDEM2Q9BV94 578 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 NMUR1Q9HB89 426 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 OLA1Q9NTK5 396 aaKnown RBP9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 USP3Q9Y6I4 520 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 ATG2BQ96BY7 2078 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 CHD6Q8TD26 2715 aa9.31□□□□□ -0.92
CTNNA1-240ENST00000523912 XPO1O14980 1071 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 NPC1O15118 1278 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 MDM4O15151 490 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 AP5Z1O43299 807 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 ZNF217O75362 1048 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 KCNK5O95279 499 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 ZBED1O96006 694 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 SETSIPP0DME0 302 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 NTSR1P30989 418 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 CORO1AP31146 461 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 P2RY2P41231 377 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 PGFP49763 221 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 TKTL1P51854 596 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 RAD23BP54727 409 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 ZNF445P59923 1031 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 YWHAGP61981 247 aaKnown RBP eCLIP9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 BST2Q10589 180 aaKnown RBP9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 EFEMP1Q12805 493 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 LMAN2Q12907 356 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 STARD3Q14849 445 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 CBWD6Q4V339 395 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 CBWD3Q5JTY5 395 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 SPDYCQ5MJ68 293 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 CBWD5Q5RIA9 395 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 DAB2IPQ5VWQ8 1189 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 LYSMD4Q5XG99 296 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 ANKRD40Q6AI12 368 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 TMEM92Q6UXU6 159 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 SLC36A4Q6YBV0 504 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 Q6ZNB5 142 aa9.3□□□□□ -0.92
CTNNA1-240ENST00000523912 RABEPKQ7Z6M1 372 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms