RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 LSM14BQ9BX40 385 aaKnown RBP17.68■□□□□ 0.42
SPIDR-221ENST00000523814 BBS2Q9BXC9 721 aa17.68■□□□□ 0.42
SPIDR-221ENST00000523814 CNTNAP3Q9BZ76 1288 aa17.68■□□□□ 0.42
SPIDR-221ENST00000523814 NAGPAQ9UK23 515 aa17.68■□□□□ 0.42
SPIDR-221ENST00000523814 NUDT5Q9UKK9 219 aa17.68■□□□□ 0.42
SPIDR-221ENST00000523814 COQ4Q9Y3A0 265 aa17.68■□□□□ 0.42
SPIDR-221ENST00000523814 KHNYNO15037 678 aaKnown RBP17.67■□□□□ 0.42
SPIDR-221ENST00000523814 RALAP11233 206 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 NTSR1P30989 418 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 MAP7D1Q3KQU3 841 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 SPDYCQ5MJ68 293 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 ARHGAP17Q68EM7 881 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 ZC3H3Q8IXZ2 948 aaKnown RBP17.67■□□□□ 0.42
SPIDR-221ENST00000523814 ABCA7Q8IZY2 2146 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 ENGASEQ8NFI3 743 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 SPATA20Q8TB22 786 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 HMGB4Q8WW32 186 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 RLN3Q8WXF3 142 aa17.67■□□□□ 0.42
SPIDR-221ENST00000523814 CDK5RAP1Q96SZ6 601 aaKnown RBP17.67■□□□□ 0.42
SPIDR-221ENST00000523814 DNAJC17Q9NVM6 304 aaKnown RBP17.67■□□□□ 0.42
SPIDR-221ENST00000523814 BCCIPQ9P287 314 aaKnown RBP eCLIP17.67■□□□□ 0.42
SPIDR-221ENST00000523814 MBD1Q9UIS9 605 aaPredicted RBP17.67■□□□□ 0.42
SPIDR-221ENST00000523814 TCRBV21S2A2A0A5A6 115 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 NEDD8-MDP1E9PL57 170 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 MDM4O15151 490 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 SLC16A3O15427 465 aaKnown RBP17.66■□□□□ 0.42
SPIDR-221ENST00000523814 MAP3K13O43283 966 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 STC2O76061 302 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 KLKB1P03952 638 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 CISD3P0C7P0 127 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 COG7P83436 770 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 FKBP3Q00688 224 aaKnown RBP17.66■□□□□ 0.42
SPIDR-221ENST00000523814 RAB41Q5JT25 222 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 ANKRD40Q6AI12 368 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 TPGS1Q6ZTW0 290 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 LPCAT2Q7L5N7 544 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 CYP2U1Q7Z449 544 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 MIB1Q86YT6 1006 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 FRMD1Q8N878 549 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 ANKRD52Q8NB46 1076 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 SPACA7Q96KW9 195 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 ARID3AQ99856 593 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 GTPBP4Q9BZE4 634 aaKnown RBP17.66■□□□□ 0.42
SPIDR-221ENST00000523814 FBXO10Q9UK96 956 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 ZNF510Q9Y2H8 683 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 MYH10P35580 1976 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 LAMA1P25391 3075 aa17.66■□□□□ 0.42
SPIDR-221ENST00000523814 A0A1W2PQF6 199 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 LNP1A1A4G5 178 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 GOLGA6L4A6NEF3 574 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 C4orf47A7E2U8 309 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 PRRT4C9JH25 899 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 SMC2O95347 1197 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 DHPSP49366 369 aaPredicted RBP17.65■□□□□ 0.42
SPIDR-221ENST00000523814 CBWD6Q4V339 395 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 CBWD3Q5JTY5 395 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 CBWD5Q5RIA9 395 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 SDE2Q6IQ49 451 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 PIGZQ86VD9 579 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 PGBD3Q8N328 593 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 ARHGAP18Q8N392 663 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 TSG101Q99816 390 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 EDEM2Q9BV94 578 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 CD248Q9HCU0 757 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 GTF3C3Q9Y5Q9 886 aa17.65■□□□□ 0.42
SPIDR-221ENST00000523814 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 GABRG2P18507 467 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 PMS1P54277 932 aaKnown RBP17.64■□□□□ 0.41
SPIDR-221ENST00000523814 SLC8A3P57103 927 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 LRRC63Q05C16 580 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 N4BP2L1Q5TBK1 243 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-221ENST00000523814 TCERG1LQ5VWI1 586 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 EGFLAMQ63HQ2 1017 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 PM20D1Q6GTS8 502 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 TOGARAM2Q6ZUX3 1019 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 TMEFF1Q8IYR6 380 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 PIGKQ92643 395 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 TIGD1Q96MW7 591 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 ACOX2Q99424 681 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 DCLK3Q9C098 648 aa17.64■□□□□ 0.41
SPIDR-221ENST00000523814 EVLQ9UI08 416 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-221ENST00000523814 CIZ1Q9ULV3 898 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-221ENST00000523814 THADAQ6YHU6 1953 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 PATE3B3GLJ2 98 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 KCNK5O95279 499 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 PENKP01210 267 aaPredicted RBP17.63■□□□□ 0.41
SPIDR-221ENST00000523814 HOXB2P14652 356 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 CHKAP35790 457 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 WASP42768 502 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 PTGER3P43115 390 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 DGKGP49619 791 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 IRX4P78413 519 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 CUL2Q13617 745 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 SYT12Q8IV01 421 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 CHPFQ8IZ52 775 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 SMARCE1Q969G3 411 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 SLC35C1Q96A29 364 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 P2RY11Q96G91 374 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 GABRG3Q99928 467 aa17.63■□□□□ 0.41
SPIDR-221ENST00000523814 ARMCX3Q9UH62 379 aaPredicted RBP17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms