RNA–Protein interactions for RNA: ENST00000523549.1

NSMCE2-211, Transcript of NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase, humanhuman

TSL 3

Gene NSMCE2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2-211ENST00000523549 USP42Q9H9J4 1324 aaKnown RBP4.87□□□□□ -1.63
NSMCE2-211ENST00000523549 SHTN1A0MZ66 631 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 KIF20AO95235 890 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 RPLP2P05387 115 aaKnown RBP4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 FOSL2P15408 326 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 PRDX5P30044 214 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 CCT4P50991 539 aaKnown RBP4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 PCBP2Q15366 365 aaKnown RBP eCLIP4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 SLC9C1Q4G0N8 1177 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 KLHL22Q53GT1 634 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 TEDDM1Q5T9Z0 273 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 OLFM4Q6UX06 510 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 ZNF804AQ7Z570 1209 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 UBE2Q1Q7Z7E8 422 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 KCNH5Q8NCM2 988 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 LTV1Q96GA3 475 aaPredicted RBP4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 CDK19Q9BWU1 502 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 VPS16Q9H269 839 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 GNL3LQ9NVN8 582 aaKnown RBP4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 ASAP1Q9ULH1 1129 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 ZMYND8Q9ULU4 1186 aaPredicted RBP4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 MRFAP1Q9Y605 127 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 COL2A1P02458 1487 aaPredicted RBP4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 MYO15AQ9UKN7 3530 aa4.86□□□□□ -1.63
NSMCE2-211ENST00000523549 DNAH14Q0VDD8 3507 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 MYO9BQ13459 2157 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 SMIM35A0A1B0GVV1 85 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 SMIM22K7EJ46 135 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 GABRDO14764 452 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 VPS4BO75351 444 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 DNAJB5O75953 348 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 RARBP10826 455 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 CHRM3P20309 590 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 CCKBRP32239 447 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 LIPAP38571 399 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 GCLCP48506 637 aaPredicted RBP4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 GUCY2FP51841 1108 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 EEFSECP57772 596 aaKnown RBP4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 MAVSQ7Z434 540 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 CHSY1Q86X52 802 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 C8orf58Q8NAV2 365 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 C1orf43Q9BWL3 253 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 DUSP22Q9NRW4 184 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 TUBA8Q9NY65 449 aaPredicted RBP4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 KDRP35968 1356 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 TAF1P21675 1872 aa4.85□□□□□ -1.63
NSMCE2-211ENST00000523549 PTPRZ1P23471 2315 aaPredicted RBP4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 CACNA1IQ9P0X4 2223 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 SSC5DA1L4H1 1573 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 SERPINB2P05120 415 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 GNAI3P08754 354 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 IL6RP08887 468 aaPredicted RBP4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 FTH1P19P0C7X4 201 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 ITGB8P26012 769 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 CYP2C18P33260 490 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 CDKN1CP49918 316 aaPredicted RBP4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 ADKP55263 362 aaKnown RBP4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 GNAI1P63096 354 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 CYP4F2P78329 520 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 HOXA4Q00056 320 aaPredicted RBP4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 ITKQ08881 620 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 USP37Q86T82 979 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 ASB2Q96Q27 587 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 ADGRE3Q9BY15 652 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 TINAGL1Q9GZM7 467 aaPredicted RBP4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 SIK2Q9H0K1 926 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 CCDC8Q9H0W5 538 aaPredicted RBP4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 PGAP2Q9UHJ9 254 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 SH2B3Q9UQQ2 575 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 DMDP11532 3685 aa4.84□□□□□ -1.63
NSMCE2-211ENST00000523549 DMXL1Q9Y485 3027 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 SLC16A3O15427 465 aaKnown RBP4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 INSIG1O15503 277 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 TLR5O60602 858 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 ONECUT2O95948 504 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 CDK11BP21127 795 aaKnown RBP4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 PIK3CGP48736 1102 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 SP2Q02086 613 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 ODF1Q14990 250 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 TRIP6Q15654 476 aaKnown RBP4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 UAP1L1Q3KQV9 507 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 PCID2Q5JVF3 399 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 SFRP4Q6FHJ7 346 aaPredicted RBP4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 HMCESQ96FZ2 354 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 ZC3H10Q96K80 434 aaKnown RBP4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 FSD1LQ9BXM9 530 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 SLC13A1Q9BZW2 595 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 ZDHHC8Q9ULC8 765 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 LAMB1P07942 1786 aa4.83□□□□□ -1.64
NSMCE2-211ENST00000523549 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 LRRC14BA6NHZ5 514 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 KCNU1A8MYU2 1149 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 QSOX1O00391 747 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 KATNA1O75449 491 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 BCAR3O75815 825 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 MMP13P45452 471 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 PHKA1P46020 1223 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 TM4SF4P48230 202 aa4.82□□□□□ -1.64
NSMCE2-211ENST00000523549 TREML2Q5T2D2 321 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms