RNA–Protein interactions for RNA: ENST00000523488.5

CSMD1-213, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 3,714 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-213ENST00000523488 CYP4F11Q9HBI6 524 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ANLNQ9NQW6 1124 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ZNF639Q9UID6 485 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 NAALAD2Q9Y3Q0 740 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 GPC6Q9Y625 555 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 MGAMO43451 1857 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 TCP10L2B9ZVM9 353 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 E9PMD0 336 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 H3BSA7 217 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 KLHL2O95198 593 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 MT-ND3P03897 115 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 SRGAP2BP0DMP2 458 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 HSPA1AP0DMV8 641 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 HSPA1BP0DMV9 641 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 DMPKQ09013 629 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 PDCD11Q14690 1871 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 NHSL2Q5HYW2 709 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 C6orf183Q5T699 404 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 BTBD8Q5XKL5 378 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 MBLAC2Q68D91 279 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 NSMFQ6X4W1 530 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ATG14Q6ZNE5 492 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 TFB1MQ8WVM0 346 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ISOC1Q96CN7 298 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 THAP11Q96EK4 314 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 VMP1Q96GC9 406 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 SERAC1Q96JX3 654 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 HEMGNQ9BXL5 484 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 RPF2Q9H7B2 306 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 TUFT1Q9NNX1 390 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 DUS2Q9NX74 493 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 CAPN8A6NHC0 703 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 CYP26A1O43174 497 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 BCAS2O75934 225 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 FAM58BPP0C7Q3 252 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 KITP10721 976 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 POLR2EP19388 210 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 TGM1P22735 817 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 IGBP1P78318 339 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ALCAMQ13740 583 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 FASTKD3Q14CZ7 662 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 VPS72Q15906 364 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 PPP4R4Q6NUP7 873 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ZNF720Q7Z2F6 126 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 CATSPER3Q86XQ3 398 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 PHF13Q86YI8 300 aaPredicted RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ARHGEF19Q8IW93 802 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 POU5F2Q8N7G0 328 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 ANKFN1Q8N957 763 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 EYA3Q99504 573 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 C20orf27Q9GZN8 174 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 SCUBE2Q9NQ36 999 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 AGPAT3Q9NRZ7 376 aa8.67□□□□□ -1.02
CSMD1-213ENST00000523488 SUCOQ9UBS9 1254 aaKnown RBP8.67□□□□□ -1.02
CSMD1-213ENST00000523488 HMX2A2RU54 273 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 XPO1O14980 1071 aaKnown RBP8.66□□□□□ -1.02
CSMD1-213ENST00000523488 SCO2O43819 266 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 RAG1P15918 1043 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 MYF6P23409 242 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 ARCN1P48444 511 aaKnown RBP8.66□□□□□ -1.02
CSMD1-213ENST00000523488 DLG4P78352 724 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 MECOMQ03112 1051 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 AP3B2Q13367 1082 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 MTMR2Q13614 643 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 ATP1A4Q13733 1029 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 SREK1Q8WXA9 508 aaKnown RBP8.66□□□□□ -1.02
CSMD1-213ENST00000523488 BHMTQ93088 406 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 NUP85Q9BW27 656 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 INPP5FQ9Y2H2 1132 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 PCDHAC2Q9Y5I4 1007 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 FAM237BA0A1B0GVD1 139 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 LPXNO60711 386 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 JRKO75564 520 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 ARPC4P59998 168 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 ESRRGP62508 458 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 CHRNDQ07001 517 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 C19orf57Q0VDD7 668 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 HSPA14Q0VDF9 509 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 CETN1Q12798 172 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 KCNJ11Q14654 390 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 SLC27A3Q5K4L6 730 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 STEAP4Q687X5 459 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 FAM117BQ6P1L5 589 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 SAPCD2Q86UD0 394 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 ANGPTL6Q8NI99 470 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 SLC7A3Q8WY07 619 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 BTBD6Q96KE9 485 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 RMDN3Q96TC7 470 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 FAM118BQ9BPY3 351 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 HEPHQ9BQS7 1158 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 TRIM56Q9BRZ2 755 aaKnown RBP8.66□□□□□ -1.02
CSMD1-213ENST00000523488 RUSC1Q9BVN2 902 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 FRMD8Q9BZ67 464 aaPredicted RBP8.66□□□□□ -1.02
CSMD1-213ENST00000523488 CPVLQ9H3G5 476 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 TRPC7Q9HCX4 862 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 GTF2IRD1Q9UHL9 959 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 ZNRF3Q9ULT6 936 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 IFT52Q9Y366 437 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 AP4B1Q9Y6B7 739 aa8.66□□□□□ -1.02
CSMD1-213ENST00000523488 MEI4A8MW99 385 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms