RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 MAML3Q96JK9 1138 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 EFHD1Q9BUP0 239 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 CACYBPQ9HB71 228 aaKnown RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 GDF3Q9NR23 364 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 LATS2Q9NRM7 1088 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 RBM22Q9NW64 420 aaKnown RBP eCLIP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 ENO1P06733 434 aaKnown RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 ETS1P14921 441 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 RBL1P28749 1068 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 TAS2R40P59535 323 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 TAF11Q15544 211 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 IMPG1Q17R60 797 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 PRUNE1Q86TP1 453 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 PHF13Q86YI8 300 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 CALML6Q8TD86 181 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 ELOVL4Q9GZR5 314 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 NT5MQ9NPB1 228 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 SALL4Q9UJQ4 1053 aa13.51□□□□□ -0.25
PCDHGB1-201ENST00000523390 DARSP14868 501 aaKnown RBP13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 HIRAP54198 1017 aaPredicted RBP13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 CHI3L2Q15782 390 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 ARID3BQ8IVW6 561 aaPredicted RBP13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 B3GALNT2Q8NCR0 500 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 E2F7Q96AV8 911 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 HES6Q96HZ4 224 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 GBP5Q96PP8 586 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 Q9H521 79 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 DMAC2Q9NW81 257 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 APOC4-APOC2K7ER74 178 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 GSTA4O15217 222 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 DHX15O43143 795 aaKnown RBP13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZWINTO95229 277 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 APOC2P02655 101 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 MYCBPAPQ8TBZ2 947 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZBTB18Q99592 522 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 DYRK4Q9NR20 520 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 TUBGCP4Q9UGJ1 667 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 NAALADL1Q9UQQ1 740 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 BTNL10A8MVZ5 291 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 OPLAHO14841 1288 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 AKT1P31749 480 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 HADHAP40939 763 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 ST8SIA6P61647 398 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZNF844Q08AG5 666 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 TSPAN17Q96FV3 270 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 SENP6Q9GZR1 1112 aaPredicted RBP13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 MANSC1Q9H8J5 431 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 LRRC40Q9H9A6 602 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 POPDC2Q9HBU9 364 aa13.5□□□□□ -0.25
PCDHGB1-201ENST00000523390 GNGT2O14610 69 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 STX7O15400 261 aaKnown RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 B4GALT4O60513 344 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 C4BPAP04003 597 aaKnown RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 MYL2P10916 166 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 NPR3P17342 541 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 SMPD1P17405 629 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ADSSP30520 456 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 BTG3Q14201 252 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZRANB3Q5FWF4 1079 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 NPNTQ6UXI9 565 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TMEM86AQ8N2M4 240 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 HTR3CQ8WXA8 447 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 FAM136AQ96C01 138 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 PPP1R2P1Q96PQ5 205 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 FICDQ9BVA6 458 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 UPF3AQ9H1J1 476 aaKnown RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ADA2Q9NZK5 511 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 CLDN5O00501 218 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 YBX3P16989 372 aaKnown RBP eCLIP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TPH1P17752 444 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TBX4P57082 545 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TRPM8Q7Z2W7 1104 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 YAF2Q8IY57 180 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 JOSD2Q8TAC2 188 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 KCNV2Q8TDN2 545 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 GIPC2Q8TF65 315 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 SPDL1Q96EA4 605 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TXNRD2Q9NNW7 524 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 FAM105AQ9NUU6 356 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TMEM39AQ9NV64 488 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 NINJ2Q9NZG7 142 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TULP2O00295 520 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 HOXC6P09630 235 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TUBP50607 506 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 CCL23P55773 120 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ACAP1Q15027 740 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 PPP1R26Q5T8A7 1209 aaPredicted RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 LRRC15Q8TF66 581 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 DCUN1D1Q96GG9 259 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 ZFP42Q96MM3 310 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 MRPL45Q9BRJ2 306 aaKnown RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 NAT9Q9BTE0 207 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 SNRNP25Q9BV90 132 aaKnown RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TRIM54Q9BYV2 358 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 TKTL2Q9H0I9 626 aa13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 AAR2Q9Y312 384 aaKnown RBP13.49□□□□□ -0.25
PCDHGB1-201ENST00000523390 RNF103O00237 685 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms