RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 PARD6AQ9NPB6 346 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 WDR35Q9P2L0 1181 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 RASAL2Q9UJF2 1139 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 STRIP2Q9ULQ0 834 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 PCDHB4Q9Y5E5 795 aa17.04■□□□□ 0.32
CLN8-206ENST00000523237 PRR5-ARHGAP8B1AHC4 643 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 NEDD8-MDP1E9PL57 170 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 O00370 1275 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 AFPP02771 609 aaKnown RBP17.03■□□□□ 0.32
CLN8-206ENST00000523237 SETSIPP0DME0 302 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 KIR2DL1P43626 348 aaPredicted RBP17.03■□□□□ 0.32
CLN8-206ENST00000523237 DGKEP52429 567 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 ARHGAP8P85298 464 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 GCNT1Q02742 428 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 EFEMP1Q12805 493 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 CRY1Q16526 586 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 Q6ZNB5 142 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 TPGS1Q6ZTW0 290 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 ALLCQ8N6M5 410 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 IL17RCQ8NAC3 791 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 LOXL4Q96JB6 756 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 IPO9Q96P70 1041 aaKnown RBP17.03■□□□□ 0.32
CLN8-206ENST00000523237 XPO6Q96QU8 1125 aaKnown RBP17.03■□□□□ 0.32
CLN8-206ENST00000523237 ULBP1Q9BZM6 244 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 MARK1Q9P0L2 795 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 RWDD2AQ9UIY3 292 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 ZNF510Q9Y2H8 683 aa17.03■□□□□ 0.32
CLN8-206ENST00000523237 ANTXRLA6NF34 631 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 TULP2O00295 520 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 CACNG3O60359 315 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 KLF8O95600 359 aaPredicted RBP17.02■□□□□ 0.32
CLN8-206ENST00000523237 TYRP14679 529 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 SDHBP21912 280 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 FOXK2Q01167 660 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 ADIGQ0VDE8 80 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 PUM1Q14671 1186 aaKnown RBP eCLIP17.02■□□□□ 0.32
CLN8-206ENST00000523237 STILQ15468 1287 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 EOGTQ5NDL2 527 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 LCLAT1Q6UWP7 414 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 ERMP1Q7Z2K6 904 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 KBTBD6Q86V97 674 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 SIX6OS1Q8N1H7 587 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 TERB1Q8NA31 727 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 TXNDC5Q8NBS9 432 aaKnown RBP17.02■□□□□ 0.32
CLN8-206ENST00000523237 EHBP1Q8NDI1 1231 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 UBA3Q8TBC4 463 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 KCNV2Q8TDN2 545 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 KCTD13Q8WZ19 329 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 KAT5Q92993 513 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 ZC3H10Q96K80 434 aaKnown RBP17.02■□□□□ 0.32
CLN8-206ENST00000523237 DCLK3Q9C098 648 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 OLA1Q9NTK5 396 aaKnown RBP17.02■□□□□ 0.32
CLN8-206ENST00000523237 SEMA4GQ9NTN9 838 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 DNAJC17Q9NVM6 304 aaKnown RBP17.02■□□□□ 0.32
CLN8-206ENST00000523237 MARCH2Q9P0N8 246 aa17.02■□□□□ 0.32
CLN8-206ENST00000523237 MYO18AQ92614 2054 aaKnown RBP17.01■□□□□ 0.31
CLN8-206ENST00000523237 ALDH1A2O94788 518 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 HMBSP08397 361 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 CHKAP35790 457 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 CNGA2Q16280 664 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 CSRP2Q16527 193 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 RSPO4Q2I0M5 234 aaPredicted RBP17.01■□□□□ 0.31
CLN8-206ENST00000523237 C10orf76Q5T2E6 689 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 EMC10Q5UCC4 262 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 GRAMD4Q6IC98 578 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 ANO7Q6IWH7 933 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 TRMT11Q7Z4G4 463 aaKnown RBP17.01■□□□□ 0.31
CLN8-206ENST00000523237 RASSF3Q86WH2 238 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 ARHGEF19Q8IW93 802 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 RBBP8NLQ8NC74 664 aaPredicted RBP17.01■□□□□ 0.31
CLN8-206ENST00000523237 TFAP2BQ92481 460 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 CNOT6LQ96LI5 555 aaKnown RBP17.01■□□□□ 0.31
CLN8-206ENST00000523237 POLMQ9NP87 494 aaPredicted RBP17.01■□□□□ 0.31
CLN8-206ENST00000523237 DLL3Q9NYJ7 618 aa17.01■□□□□ 0.31
CLN8-206ENST00000523237 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.01■□□□□ 0.31
CLN8-206ENST00000523237 SLC12A8A0AV02 714 aa17■□□□□ 0.31
CLN8-206ENST00000523237 M0QYV0 167 aa17■□□□□ 0.31
CLN8-206ENST00000523237 RNF225M0QZC1 329 aaPredicted RBP17■□□□□ 0.31
CLN8-206ENST00000523237 SGK1O00141 431 aa17■□□□□ 0.31
CLN8-206ENST00000523237 FOXD2O60548 495 aaPredicted RBP17■□□□□ 0.31
CLN8-206ENST00000523237 KLKB1P03952 638 aa17■□□□□ 0.31
CLN8-206ENST00000523237 CHRM1P11229 460 aaPredicted RBP17■□□□□ 0.31
CLN8-206ENST00000523237 CORO1AP31146 461 aaKnown RBP17■□□□□ 0.31
CLN8-206ENST00000523237 ANP32AP39687 249 aaKnown RBP17■□□□□ 0.31
CLN8-206ENST00000523237 ELF2Q15723 593 aa17■□□□□ 0.31
CLN8-206ENST00000523237 PKDCCQ504Y2 493 aa17■□□□□ 0.31
CLN8-206ENST00000523237 USP39Q53GS9 565 aaKnown RBP17■□□□□ 0.31
CLN8-206ENST00000523237 TMEM92Q6UXU6 159 aa17■□□□□ 0.31
CLN8-206ENST00000523237 BHLHA9Q7RTU4 235 aa17■□□□□ 0.31
CLN8-206ENST00000523237 CREBRFQ8IUR6 639 aa17■□□□□ 0.31
CLN8-206ENST00000523237 SCML4Q8N228 414 aa17■□□□□ 0.31
CLN8-206ENST00000523237 ZNF513Q8N8E2 541 aaPredicted RBP17■□□□□ 0.31
CLN8-206ENST00000523237 MDGA1Q8NFP4 955 aa17■□□□□ 0.31
CLN8-206ENST00000523237 RNF139Q8WU17 664 aa17■□□□□ 0.31
CLN8-206ENST00000523237 NDRG1Q92597 394 aaKnown RBP17■□□□□ 0.31
CLN8-206ENST00000523237 TPSD1Q9BZJ3 242 aa17■□□□□ 0.31
CLN8-206ENST00000523237 INTS2Q9H0H0 1204 aaKnown RBP17■□□□□ 0.31
CLN8-206ENST00000523237 CNGB3Q9NQW8 809 aa17■□□□□ 0.31
CLN8-206ENST00000523237 CDV3Q9UKY7 258 aaKnown RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms