RNA–Protein interactions for RNA: ENST00000522998.1

PCM1-217, Transcript of pericentriolar material 1, humanhuman

TSL 3

Gene PCM1, Length 493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-217ENST00000522998 ELP5Q8TE02 316 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 PIGKQ92643 395 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 MSI2Q96DH6 328 aaKnown RBP3.24□□□□□ -1.89
PCM1-217ENST00000522998 CDK5RAP3Q96JB5 506 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 RMI1Q9H9A7 625 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 USP29Q9HBJ7 922 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 FZD3Q9NPG1 666 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 PAPOLBQ9NRJ5 636 aaKnown RBP3.24□□□□□ -1.89
PCM1-217ENST00000522998 HOMER2Q9NSB8 354 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 FZD4Q9ULV1 537 aa3.24□□□□□ -1.89
PCM1-217ENST00000522998 WASHC2CQ9Y4E1 1318 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 TRBV5-3A0A0A0MS03 114 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 SRGAP2O75044 1071 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 LDB3O75112 727 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 TCEA1P23193 301 aaKnown RBP3.23□□□□□ -1.89
PCM1-217ENST00000522998 RPS6KB1P23443 525 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 HOXA7P31268 230 aaPredicted RBP3.23□□□□□ -1.89
PCM1-217ENST00000522998 MCM5P33992 734 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 COMPP49747 757 aaPredicted RBP3.23□□□□□ -1.89
PCM1-217ENST00000522998 GUCY2FP51841 1108 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 DSCR9P59020 149 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 GPC5P78333 572 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 ITKQ08881 620 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 MTMR1Q13613 665 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 PTPN21Q16825 1174 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 MORC1Q86VD1 984 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 PNPLA1Q8N8W4 532 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 STAG1Q8WVM7 1258 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 MTMR8Q96EF0 704 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 P2RX7Q99572 595 aaKnown RBP3.23□□□□□ -1.89
PCM1-217ENST00000522998 SLC13A1Q9BZW2 595 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 CCDC8Q9H0W5 538 aaPredicted RBP3.23□□□□□ -1.89
PCM1-217ENST00000522998 C6orf106Q9H6K1 298 aaPredicted RBP3.23□□□□□ -1.89
PCM1-217ENST00000522998 MLXIPLQ9NP71 852 aa3.23□□□□□ -1.89
PCM1-217ENST00000522998 DDX56Q9NY93 547 aaKnown RBP3.23□□□□□ -1.89
PCM1-217ENST00000522998 A0A0G2JK05 382 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 H0YGN5 161 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 EXOC5O00471 708 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 PODXLO00592 558 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 ATG13O75143 517 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 CCND1P24385 295 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 TIAL1Q01085 375 aaKnown RBP eCLIP3.22□□□□□ -1.89
PCM1-217ENST00000522998 DEUP1Q05D60 604 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 DDR1Q08345 913 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 IZUMO4Q1ZYL8 232 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 SLC4A8Q2Y0W8 1093 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 BRDTQ58F21 947 aaPredicted RBP3.22□□□□□ -1.89
PCM1-217ENST00000522998 TRILQ7L0X0 811 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 RTL10Q7L3V2 364 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 MPP5Q8N3R9 675 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 LPAR1Q92633 364 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 MRGPRX1Q96LB2 322 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 ASPSCR1Q9BZE9 553 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 TRIM5Q9C035 493 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 ARMT1Q9H993 441 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 AGO4Q9HCK5 861 aaKnown RBP3.22□□□□□ -1.89
PCM1-217ENST00000522998 PIH1D1Q9NWS0 290 aaKnown RBP3.22□□□□□ -1.89
PCM1-217ENST00000522998 AGO2Q9UKV8 859 aaKnown RBP3.22□□□□□ -1.89
PCM1-217ENST00000522998 ASAP1Q9ULH1 1129 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 PCDHGB1Q9Y5G3 927 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 CDY1Q9Y6F8 540 aa3.22□□□□□ -1.89
PCM1-217ENST00000522998 CD3EAPO15446 510 aaKnown RBP3.21□□□□□ -1.9
PCM1-217ENST00000522998 PRPF4O43172 522 aaKnown RBP eCLIP3.21□□□□□ -1.9
PCM1-217ENST00000522998 RGS10O43665 173 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 UGDHO60701 494 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 KATNA1O75449 491 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 RASAL1O95294 804 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 POU2F2P09086 479 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 PDGFRBP09619 1106 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 JAK3P52333 1124 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 EVA1CP58658 441 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 TXNL4AP83876 142 aaKnown RBP3.21□□□□□ -1.9
PCM1-217ENST00000522998 MTA1Q13330 715 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 CTBP1Q13363 440 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 INO80DQ53TQ3 878 aaPredicted RBP3.21□□□□□ -1.9
PCM1-217ENST00000522998 WASHC2DQ5SRD0 308 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 CACHD1Q5VU97 1274 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 ZNF783Q6ZMS7 281 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 RBM44Q6ZP01 1051 aaKnown RBP3.21□□□□□ -1.9
PCM1-217ENST00000522998 SRGAP1Q7Z6B7 1085 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 TFAP2DQ7Z6R9 452 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 CATIPQ7Z7H3 387 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 ADGRF4Q8IZF3 695 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 FAM71DQ8N9W8 422 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 ZBTB45Q96K62 511 aaPredicted RBP3.21□□□□□ -1.9
PCM1-217ENST00000522998 THSD1Q9NS62 852 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 MYO6Q9UM54 1294 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 SPEF1Q9Y4P9 236 aa3.21□□□□□ -1.9
PCM1-217ENST00000522998 RPS10-NUDT3A0A1W2PQS6 291 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 A8MVJ9 347 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 PRAMEF2O60811 474 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 DDNO94850 711 aaPredicted RBP3.2□□□□□ -1.9
PCM1-217ENST00000522998 PKMP14618 531 aaKnown RBP3.2□□□□□ -1.9
PCM1-217ENST00000522998 CD19P15391 556 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 TFEBP19484 476 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 ADRA1DP25100 572 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 FAM50AQ14320 339 aaKnown RBP3.2□□□□□ -1.9
PCM1-217ENST00000522998 HIST2H2BCQ6DN03 193 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 PHF21BQ96EK2 531 aa3.2□□□□□ -1.9
PCM1-217ENST00000522998 PIMREGQ9BSJ6 248 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms