RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 CSRNP2Q9H175 543 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 TRPV5Q9NQA5 729 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 VPS45Q9NRW7 570 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 WRAP73Q9P2S5 460 aaPredicted RBP6.98□□□□□ -1.29
VPS13B-211ENST00000522802 MTRRQ9UBK8 725 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 NEUROG3Q9Y4Z2 214 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 PCDHGA5Q9Y5G8 931 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 RBM8AQ9Y5S9 174 aaKnown RBP6.98□□□□□ -1.29
VPS13B-211ENST00000522802 BACE2Q9Y5Z0 518 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 CDY1Q9Y6F8 540 aa6.98□□□□□ -1.29
VPS13B-211ENST00000522802 TNRC6BQ9UPQ9 1833 aaKnown RBP6.98□□□□□ -1.29
VPS13B-211ENST00000522802 SPECC1L-ADORA2AF8WAN1 911 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 hCG_1984214I3L0E3 225 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 PTGESO14684 152 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 ZNF263O14978 683 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 MOSPD3O75425 235 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 PSMD10O75832 226 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 NPTXRO95502 500 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 SCG5P05408 212 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 PRKCBP05771 671 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 ARF4P18085 180 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-211ENST00000522802 TKTP29401 623 aaKnown RBP6.97□□□□□ -1.29
VPS13B-211ENST00000522802 MCM5P33992 734 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 GRIA2P42262 883 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 NUCB1Q02818 461 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 MBTD1Q05BQ5 628 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 TUSC3Q13454 348 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 EMC2Q15006 297 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 PON2Q15165 354 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 NAB2Q15742 525 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 COL28A1Q2UY09 1125 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 PLK5Q496M5 336 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 FYB2Q5VWT5 728 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 B3GNT9Q6UX72 402 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 PROSER1Q86XN7 944 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 SMC5Q8IY18 1101 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 ZNF713Q8N859 430 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-211ENST00000522802 ZSCAN18Q8TBC5 510 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-211ENST00000522802 DEPDC1BQ8WUY9 529 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 SMARCD2Q92925 531 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 CCDC136Q96JN2 1154 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 ZFYVE19Q96K21 471 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 CCDC140Q96MF4 163 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 SPATA9Q9BWV2 254 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 TRIM6Q9C030 488 aaPredicted RBP6.97□□□□□ -1.29
VPS13B-211ENST00000522802 DHX33Q9H6R0 707 aaKnown RBP6.97□□□□□ -1.29
VPS13B-211ENST00000522802 GIT1Q9Y2X7 761 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 TRIP11Q15643 1979 aa6.97□□□□□ -1.29
VPS13B-211ENST00000522802 ZMYM2Q9UBW7 1377 aa6.96□□□□□ -1.29
VPS13B-211ENST00000522802 HECTD1Q9ULT8 2610 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 SPAARA0A1B0GVQ0 90 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ESYT2A0FGR8 921 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ARHGEF37A1IGU5 675 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 MYBPHLA2RUH7 354 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 HEPACAM2A8MVW5 462 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 PATE3B3GLJ2 98 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 I3L4J1 428 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 INO80B-WBP1J3KQ70 363 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 BIN1O00499 593 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 CDX4O14627 284 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 DCLK1O15075 740 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 SEC24AO95486 1093 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 TDP2O95551 362 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 CEACAM1P13688 526 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 RAC2P15153 192 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 JUNBP17275 347 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 CSRP1P21291 193 aaKnown RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 CHMLP26374 656 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 SEPHS1P49903 392 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 KPNA1P52294 538 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ROR1Q01973 937 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 CREB5Q02930 508 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 SCRN1Q12765 414 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 SF1Q15637 639 aaKnown RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 PFKFB3Q16875 520 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 CYP2R1Q6VVX0 501 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 PDZD4Q76G19 769 aaPredicted RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 SLCO6A1Q86UG4 719 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 FERMT3Q86UX7 667 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 SGMS1Q86VZ5 419 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 TMTC2Q8N394 836 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 RDM1Q8NG50 284 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 CCDC51Q96ER9 411 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ZC3H10Q96K80 434 aaKnown RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 TCEANC2Q96MN5 208 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 DNAJC7Q99615 494 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 MTA3Q9BTC8 594 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ZMYND12Q9H0C1 365 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 GLT8D2Q9H1C3 349 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ZSWIM4Q9H7M6 989 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ARHGEF4Q9NR80 690 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 RBM28Q9NW13 759 aaKnown RBP6.96□□□□□ -1.3
VPS13B-211ENST00000522802 GTSE1Q9NYZ3 720 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 INSL5Q9Y5Q6 135 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ACACAQ13085 2346 aa6.96□□□□□ -1.3
VPS13B-211ENST00000522802 ZNF462Q96JM2 2506 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 THADAQ6YHU6 1953 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 BCLAF3A2AJT9 711 aaKnown RBP6.95□□□□□ -1.3
VPS13B-211ENST00000522802 GOLGA8AA7E2F4 631 aa6.95□□□□□ -1.3
VPS13B-211ENST00000522802 GOLGA8BA8MQT2 603 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms