RNA–Protein interactions for RNA: ENST00000522515.5

LSM1-204, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 3

Gene LSM1, Length 1,568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-204ENST00000522515 CLUHO75153 1309 aa17.01■□□□□ 0.31
LSM1-204ENST00000522515 MDM4O15151 490 aa17■□□□□ 0.31
LSM1-204ENST00000522515 COCHO43405 550 aa17■□□□□ 0.31
LSM1-204ENST00000522515 PDGFRAP16234 1089 aa17■□□□□ 0.31
LSM1-204ENST00000522515 TUBP50607 506 aa17■□□□□ 0.31
LSM1-204ENST00000522515 HS1BP3Q53T59 392 aa17■□□□□ 0.31
LSM1-204ENST00000522515 RSRC2Q7L4I2 434 aaKnown RBP17■□□□□ 0.31
LSM1-204ENST00000522515 TXLNBQ8N3L3 684 aa17■□□□□ 0.31
LSM1-204ENST00000522515 ZNF276Q8N554 614 aa17■□□□□ 0.31
LSM1-204ENST00000522515 RNF139Q8WU17 664 aa17■□□□□ 0.31
LSM1-204ENST00000522515 TRIM44Q96DX7 344 aaPredicted RBP17■□□□□ 0.31
LSM1-204ENST00000522515 BTBD6Q96KE9 485 aa17■□□□□ 0.31
LSM1-204ENST00000522515 CYP2S1Q96SQ9 504 aa17■□□□□ 0.31
LSM1-204ENST00000522515 SLC46A2Q9BY10 475 aa17■□□□□ 0.31
LSM1-204ENST00000522515 ADAM33Q9BZ11 813 aa17■□□□□ 0.31
LSM1-204ENST00000522515 RNF38Q9H0F5 515 aa17■□□□□ 0.31
LSM1-204ENST00000522515 ANAPC7Q9UJX3 599 aa17■□□□□ 0.31
LSM1-204ENST00000522515 USP15Q9Y4E8 981 aaPredicted RBP17■□□□□ 0.31
LSM1-204ENST00000522515 SPTBN5Q9NRC6 3674 aaKnown RBP17■□□□□ 0.31
LSM1-204ENST00000522515 A0A0A6YYK5 440 aaPredicted RBP16.99■□□□□ 0.31
LSM1-204ENST00000522515 BTNL10A8MVZ5 291 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 TFE3P19532 575 aaPredicted RBP16.99■□□□□ 0.31
LSM1-204ENST00000522515 GPD1P21695 349 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 ARHGAP25P42331 645 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 MTHFRP42898 656 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 ZNF252P-AS1Q0IIN9 211 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 EFEMP1Q12805 493 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 CBX2Q14781 532 aaPredicted RBP16.99■□□□□ 0.31
LSM1-204ENST00000522515 CCDC14Q49A88 953 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 C10orf120Q5SQS8 335 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 GPR158Q5T848 1215 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 MSANTD2Q6P1R3 559 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 GET4Q7L5D6 327 aaPredicted RBP16.99■□□□□ 0.31
LSM1-204ENST00000522515 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
LSM1-204ENST00000522515 ADAM32Q8TC27 787 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 DQX1Q8TE96 717 aaKnown RBP16.99■□□□□ 0.31
LSM1-204ENST00000522515 SUSD6Q92537 303 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 NT5C3BQ969T7 300 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 POMKQ9H5K3 350 aa16.99■□□□□ 0.31
LSM1-204ENST00000522515 GRXCR2A6NFK2 248 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 BUB1O43683 1085 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 MTA2O94776 668 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 SDC4P31431 198 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 ATP5C1P36542 298 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 NOP2P46087 812 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 ZNF143P52747 638 aaPredicted RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 C15orf59Q2T9L4 293 aaPredicted RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 SLC25A52Q3SY17 297 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 ARHGAP15Q53QZ3 475 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 SH3PXD2AQ5TCZ1 1133 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 OTUD1Q5VV17 481 aaPredicted RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 REXO1L1PQ8IX06 675 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 ARL14EPQ8N8R7 260 aaPredicted RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 ZSWIM3Q96MP5 696 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 CDK5RAP1Q96SZ6 601 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 TBCBQ99426 244 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 NPY6RQ99463 290 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 SLITRK6Q9H5Y7 841 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 TASP1Q9H6P5 420 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 LZTFL1Q9NQ48 299 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 OLA1Q9NTK5 396 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 TRMT1Q9NXH9 659 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 CALCOCO1Q9P1Z2 691 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 SFMBT1Q9UHJ3 866 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 STAP1Q9ULZ2 295 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 C5orf42Q9H799 3197 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 MACROD2A1Z1Q3 448 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 USP27XA6NNY8 438 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 KRT86O43790 486 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 OLFM2O95897 454 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 TRUB2O95900 331 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 HDCP19113 662 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 DDX6P26196 483 aaKnown RBP eCLIP16.98■□□□□ 0.31
LSM1-204ENST00000522515 DEKP35659 375 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 PTPN9P43378 593 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 SULT1E1P49888 294 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 HADHBP55084 474 aaKnown RBP16.98■□□□□ 0.31
LSM1-204ENST00000522515 ATP11AP98196 1134 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 CDO1Q16878 200 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 RAB6CQ53S08 254 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 KLHDC10Q6PID8 442 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 ZNF662Q6ZS27 426 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 TADA2BQ86TJ2 420 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 TAC4Q86UU9 113 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 NPAS3Q8IXF0 933 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 FNIP1Q8TF40 1166 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 FGF13Q92913 245 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 TSGA10Q9BZW7 698 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 NACA2Q9H009 215 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 RAB6CQ9H0N0 254 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 SMOC2Q9H3U7 446 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 RASAL2Q9UJF2 1139 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 DNMT3LQ9UJW3 386 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 GUCA1BQ9UMX6 200 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 PAXBP1Q9Y5B6 917 aa16.98■□□□□ 0.31
LSM1-204ENST00000522515 M0QYT0 321 aa16.97■□□□□ 0.31
LSM1-204ENST00000522515 MYO1FO00160 1098 aa16.97■□□□□ 0.31
LSM1-204ENST00000522515 DPYSL4O14531 572 aa16.97■□□□□ 0.31
LSM1-204ENST00000522515 CCP110O43303 1012 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms