RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 FKBP1AP62942 108 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 ZC3H3Q8IXZ2 948 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 ELMOD1Q8N336 334 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 CAAP1Q9H8G2 361 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 GPBP1L1Q9HC44 474 aaPredicted RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 NDUFA13Q9P0J0 144 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 SLC12A4Q9UP95 1085 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 AAR2Q9Y312 384 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 MARF1Q9Y4F3 1742 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 IQCA1LA6NCM1 817 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 MAN1A2O60476 641 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 FKBP6O75344 327 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 AP1G2O75843 785 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 SERPINB10P48595 397 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 RPL10AP62906 217 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 BTKQ06187 659 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 SLC45A4Q5BKX6 768 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 EMC10Q5UCC4 262 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 SEL1L3Q68CR1 1132 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 ZDHHC18Q9NUE0 388 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 FARP1Q9Y4F1 1045 aaPredicted RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 XPO1O14980 1071 aaKnown RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 CXCL8P10145 99 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 PTPN7P35236 360 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 THEMIS2Q5TEJ8 643 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 NAIF1Q69YI7 327 aaPredicted RBP14.24□□□□□ -0.13
SYNPO-205ENST00000522122 STRA8Q7Z7C7 330 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 MFN1Q8IWA4 741 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 CCDC126Q96EE4 140 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 FAR2Q96K12 515 aa14.24□□□□□ -0.13
SYNPO-205ENST00000522122 RGS4P49798 205 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 DAB2P98082 770 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 MGAT5Q09328 741 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 GLB1LQ6UWU2 654 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 METTL7BQ6UX53 244 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 TMPRSS6Q8IU80 811 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 APOPT1Q96IL0 206 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 TBCBQ99426 244 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 KIAA1683Q9H0B3 1180 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 RUVBL2Q9Y230 463 aaKnown RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 PKP3Q9Y446 797 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ANKRD63C9JTQ0 380 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 MTA2O94776 668 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 RPA3P35244 121 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 LAMTOR4Q0VGL1 99 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 WLSQ5T9L3 541 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 CHSY1Q86X52 802 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ZFPM1Q8IX07 1006 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 GANCQ8TET4 914 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 DCUN1D1Q96GG9 259 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 COG4Q9H9E3 785 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 GRHL1Q9NZI5 618 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 RPL26L1Q9UNX3 145 aaKnown RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ADAMTS7Q9UKP4 1686 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 H0YGN5 161 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 PLOD1Q02809 727 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 SLC34A1Q06495 639 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 MPP3Q13368 585 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 PARP6Q2NL67 630 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 TTC27Q6P3X3 843 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 BNC2Q6ZN30 1099 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 UNC45BQ8IWX7 931 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ZNF398Q8TD17 642 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 PCDHB18PQ96TA0 734 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ASCC2Q9H1I8 757 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 CHST12Q9NRB3 414 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 NFS1Q9Y697 457 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 MYH2Q9UKX2 1941 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 TBC1D4O60343 1298 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 TPST1O60507 370 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 RHOBTB1O94844 696 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 HOXA10P31260 410 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 BNIP1Q12981 228 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 TAF1CQ15572 869 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 MAPRE1Q15691 268 aaKnown RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 PDK4Q16654 411 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 KCTD19Q17RG1 926 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ZPBP2Q6X784 338 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ZNF512Q96ME7 567 aaPredicted RBP14.23□□□□□ -0.13
SYNPO-205ENST00000522122 TEX12Q9BXU0 123 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 ACOT9Q9Y305 439 aa14.23□□□□□ -0.13
SYNPO-205ENST00000522122 SLCO1B7G3V0H7 640 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 FCHO1O14526 889 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 GLRBP48167 497 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 PTRHD1Q6GMV3 140 aaKnown RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 LRRC8BQ6P9F7 803 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 C6orf89Q6UWU4 347 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 MBOAT7Q96N66 472 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 PARK7Q99497 189 aaKnown RBP14.22□□□□□ -0.13
SYNPO-205ENST00000522122 APOL2Q9BQE5 337 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ZMYM2Q9UBW7 1377 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ROBO1Q9Y6N7 1651 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ATP9AO75110 1047 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 CBX6O95503 412 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 CHRM3P20309 590 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 CYP2B6P20813 491 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 CYP2F1P24903 491 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ETFBP38117 255 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 ACVR2BQ13705 512 aa14.22□□□□□ -0.13
SYNPO-205ENST00000522122 CHD4Q14839 1912 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms