RNA–Protein interactions for RNA: ENST00000521678.1

IGHV3-60-201, Transcript of immunoglobulin heavy variable 3-60 (pseudogene), humanhuman

BASIC

Gene IGHV3-60, Length 354 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-60-201ENST00000521678 CADM4Q8NFZ8 388 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 C1orf216Q8TAB5 229 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 PLEKHO2Q8TD55 490 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 SCFD1Q8WVM8 642 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 P2RY11Q96G91 374 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 USP28Q96RU2 1077 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 BBS2Q9BXC9 721 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 SDCBP2Q9H190 292 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 SLC6A17Q9H1V8 727 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 FBXO44Q9H4M3 255 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 SMYD3Q9H7B4 428 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 CD93Q9NPY3 652 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 CGNQ9P2M7 1197 aaKnown RBP12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 DKK4Q9UBT3 224 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 SLC27A6Q9Y2P4 619 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 PCDHB9Q9Y5E1 797 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 ASXL3Q9C0F0 2248 aa12.16□□□□□ -0.46
IGHV3-60-201ENST00000521678 A0A1B0GTW7 788 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 NEDD8-MDP1E9PL57 170 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 NDUFS2O75306 463 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 AP1G2O75843 785 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 C4BPAP04003 597 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 C7P10643 843 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 ACO1P21399 889 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 SYT1P21579 422 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 MAOBP27338 520 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 CD6P30203 668 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 ATP5C1P36542 298 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 AP3M2P53677 418 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 BNC1Q01954 994 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 CEBPZQ03701 1054 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 GRIK2Q13002 908 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 BMT2Q1RMZ1 405 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 FAM26FQ5R3K3 315 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 C19orf48Q6RUI8 117 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 Q6ZNB5 142 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 ACOT1Q86TX2 421 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 RGL4Q8IZJ4 473 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 PDILTQ8N807 584 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 TMEM174Q8WUU8 243 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 C7orf25Q9BPX7 421 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 CUEDC2Q9H467 287 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 CCDC86Q9H6F5 360 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 ASH1LQ9NR48 2969 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 TLR8Q9NR97 1041 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 OSER1Q9NX31 292 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 CACNA2D2Q9NY47 1150 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 USP36Q9P275 1121 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 PCOLCE2Q9UKZ9 415 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 SCML2Q9UQR0 700 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 APOBEC2Q9Y235 224 aaKnown RBP12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 RAD54BQ9Y620 910 aa12.15□□□□□ -0.46
IGHV3-60-201ENST00000521678 HHLA1C9JL84 531 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 NPC1O15118 1278 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 IGLV3-19P01714 112 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 IRF1P10914 325 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 PLA2G4AP47712 749 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 NASPP49321 788 aaPredicted RBP12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 DGKGP49619 791 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 CYP2J2P51589 502 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 AMPD3Q01432 767 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 FUT11Q495W5 492 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 ZNF667Q5HYK9 610 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 TPGS1Q6ZTW0 290 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 TMPRSS7Q7RTY8 843 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 BAHD1Q8TBE0 780 aaPredicted RBP12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 PARD3BQ8TEW8 1205 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 TOE1Q96GM8 510 aaKnown RBP12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 MED10Q9BTT4 135 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 MKRN2Q9H000 416 aaKnown RBP12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 NACA2Q9H009 215 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 PCDHGB2Q9Y5G2 931 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 STON1Q9Y6Q2 735 aa12.14□□□□□ -0.47
IGHV3-60-201ENST00000521678 UBE4BO95155 1302 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 ADAMTS9Q9P2N4 1935 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 URB1O60287 2271 aaKnown RBP12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 METTL12A8MUP2 240 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 KCNJ18B7U540 433 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 PHACTR2O75167 634 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 VNN1O95497 513 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 PENKP01210 267 aaPredicted RBP12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 KLKB1P03952 638 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 OXTRP30559 389 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 CASP4P49662 377 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 TPMTP51580 245 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 NCOA4Q13772 614 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 COL28A1Q2UY09 1125 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 UNC93AQ86WB7 457 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 C12orf29Q8N999 325 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 RBBP8NLQ8NC74 664 aaPredicted RBP12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 LINC00301Q8NCQ3 95 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 SLC2A14Q8TDB8 520 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 HNRNPABQ99729 332 aaKnown RBP12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 GPR174Q9BXC1 333 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 PRDM16Q9HAZ2 1276 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 NMUR1Q9HB89 426 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 SCUBE2Q9NQ36 999 aa12.13□□□□□ -0.47
IGHV3-60-201ENST00000521678 KRT82Q9NSB4 513 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms