RNA–Protein interactions for RNA: ENST00000520857.5

TRAPPC9-208, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-208ENST00000520857 ANKRD20A4Q4UJ75 823 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 DACT2Q5SW24 774 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 TMCO4Q5TGY1 634 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 CDAN1Q8IWY9 1227 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 SREK1Q8WXA9 508 aaKnown RBP13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 CLMNQ96JQ2 1002 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 KCNK16Q96T55 309 aa13.27□□□□□ -0.29
TRAPPC9-208ENST00000520857 ITM2AO43736 263 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SPATA31D3P0C874 917 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SRGAP2BP0DMP2 458 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 RGS2P41220 211 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 ALDH1A3P47895 512 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 RGS7P49802 495 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 YWHAZP63104 245 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SCARA3Q6AZY7 606 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SPATA31D4Q6ZUB0 917 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 PDSS2Q86YH6 399 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 USP13Q92995 863 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 LENG1Q96BZ8 264 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 JPH1Q9HDC5 661 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SLC17A6Q9P2U8 582 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 CDH22Q9UJ99 828 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 ARHGAP26Q9UNA1 814 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 A0A088AWK7 358 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 TMCC1O94876 653 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 LYPLA2O95372 231 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 DHRS4L1P0CG22 281 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCND2P30279 289 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 CAP2P40123 477 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 FLOT2Q14254 428 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 ACAP1Q15027 740 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 C15orf59Q2T9L4 293 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 ANGEL2Q5VTE6 544 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 AAGABQ6PD74 315 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 TRIM74Q86UV6 250 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 TRIM73Q86UV7 250 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCDC60Q8IWA6 550 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 MZB1Q8WU39 189 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 RNPEPQ9H4A4 650 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 ACSS2Q9NR19 701 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SMYD2Q9NRG4 433 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 LMCD1Q9NZU5 365 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 LZTS1Q9Y250 596 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 MYH9P35579 1960 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 LAMB2P55268 1798 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SMIM31A0A1B0GVY4 71 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 MED7O43513 233 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 PEX1O43933 1283 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 SIN3BO75182 1162 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 LSM8O95777 96 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 ITGA2BP08514 1039 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 PKNOX1P55347 436 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 CYLC2Q14093 348 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 FSCBQ5H9T9 825 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 JADE3Q92613 823 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 DGCR14Q96DF8 476 aaKnown RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 COPS7BQ9H9Q2 264 aaPredicted RBP13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 XPNPEP1Q9NQW7 623 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 RNF146Q9NTX7 359 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 POLIQ9UNA4 740 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 POMPQ9Y244 141 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 FIS1Q9Y3D6 152 aa13.26□□□□□ -0.29
TRAPPC9-208ENST00000520857 NHSQ6T4R5 1651 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 ZNF536O15090 1300 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 ARHGAP10A1A4S6 786 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 NELFEP18615 380 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 GALK1P51570 392 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 LSAMPQ13449 338 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 ZNF667Q5HYK9 610 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 SERPINI1Q99574 410 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 C20orf27Q9GZN8 174 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 NDUFA13Q9P0J0 144 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 PLA2G4CQ9UP65 541 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 CAPN14A8MX76 684 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 RPL5P46777 297 aaKnown RBP13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 WASHC5Q12768 1159 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 ART3Q13508 389 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 B3GNT6Q6ZMB0 384 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 UNC5AQ6ZN44 842 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 UNC5BQ8IZJ1 945 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 ITFG2Q969R8 447 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 TEX264Q9Y6I9 313 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 INO80B-WBP1J3KQ70 363 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 APOL1O14791 398 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 TBC1D12O60347 775 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 ASNSP08243 561 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 RXRBP28702 533 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 ACTR2P61160 394 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 SH3PXD2AQ5TCZ1 1133 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 KRT80Q6KB66 452 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 CES3Q6UWW8 571 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 DHRS4Q9BTZ2 278 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 CCDC106Q9BWC9 280 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 INO80BQ9C086 356 aaPredicted RBP13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 TMCO1Q9UM00 188 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 TELO2Q9Y4R8 837 aa13.25□□□□□ -0.29
TRAPPC9-208ENST00000520857 SYNJ2BP-COX16A0A087WUM0 186 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 HMGCRP04035 888 aa13.24□□□□□ -0.29
TRAPPC9-208ENST00000520857 SETSIPP0DME0 302 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms