RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 PSEN1P49768 467 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 MXI1P50539 228 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 C10orf120Q5SQS8 335 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 TPGS1Q6ZTW0 290 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 TADA2BQ86TJ2 420 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 ZNF276Q8N554 614 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 TTC39CQ8N584 583 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 PIGKQ92643 395 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 EEF2KMTQ96G04 330 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 HEXIM2Q96MH2 286 aaKnown RBP20.68■□□□□ 0.9
PABPC1-215ENST00000520804 RAB20Q9NX57 234 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 MBD1Q9UIS9 605 aaPredicted RBP20.68■□□□□ 0.9
PABPC1-215ENST00000520804 NAGPAQ9UK23 515 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 PLXND1Q9Y4D7 1925 aa20.68■□□□□ 0.9
PABPC1-215ENST00000520804 MYO18AQ92614 2054 aaKnown RBP20.68■□□□□ 0.9
PABPC1-215ENST00000520804 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 C4orf47A7E2U8 309 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 PATE3B3GLJ2 98 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 CETN3O15182 167 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 STX10O60499 249 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 KCNK5O95279 499 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 HOXB2P14652 356 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 PMLP29590 882 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 NTSR1P30989 418 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 SPDYCQ5MJ68 293 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 EGFLAMQ63HQ2 1017 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 Q6ZNB5 142 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 MIB1Q86YT6 1006 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 TMEFF1Q8IYR6 380 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 FBXL13Q8NEE6 735 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 TMEM176AQ96HP8 235 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 CISHQ9NSE2 258 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 CLIC5Q9NZA1 410 aa20.67■□□□□ 0.9
PABPC1-215ENST00000520804 TNRC6BQ9UPQ9 1833 aaKnown RBP20.67■□□□□ 0.9
PABPC1-215ENST00000520804 STC2O76061 302 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 EPB41P11171 864 aaKnown RBP20.66■□□□□ 0.9
PABPC1-215ENST00000520804 RALAP11233 206 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 GABRG2P18507 467 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 RAD23BP54727 409 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 TOGARAM2Q6ZUX3 1019 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 SLC4A11Q8NBS3 891 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 CDK5RAP1Q96SZ6 601 aaKnown RBP20.66■□□□□ 0.9
PABPC1-215ENST00000520804 UBXN6Q9BZV1 441 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 FAM124BQ9H5Z6 455 aaPredicted RBP20.66■□□□□ 0.9
PABPC1-215ENST00000520804 RMND1Q9NWS8 449 aa20.66■□□□□ 0.9
PABPC1-215ENST00000520804 EVLQ9UI08 416 aaPredicted RBP20.66■□□□□ 0.9
PABPC1-215ENST00000520804 A0A1W2PQF6 199 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 PRRT4C9JH25 899 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 CISD3P0C7P0 127 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 WASP42768 502 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 PTGER3P43115 390 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 IRX4P78413 519 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 PNOCQ13519 176 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 DAB2IPQ5VWQ8 1189 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 ARHGAP17Q68EM7 881 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 ARMCX6Q7L4S7 300 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 CHPFQ8IZ52 775 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 FMR1NBQ8N0W7 255 aaPredicted RBP20.65■□□□□ 0.9
PABPC1-215ENST00000520804 ACOX2Q99424 681 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 ARID3AQ99856 593 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 TMEM9BQ9NQ34 198 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 ANGPTL2Q9UKU9 493 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 LAMA1P25391 3075 aa20.65■□□□□ 0.9
PABPC1-215ENST00000520804 CNOT1A5YKK6 2376 aaKnown RBP20.65■□□□□ 0.9
PABPC1-215ENST00000520804 CDX4O14627 284 aaPredicted RBP20.64■□□□□ 0.89
PABPC1-215ENST00000520804 KLKB1P03952 638 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 PRCPP42785 496 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 DGKGP49619 791 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 SDE2Q6IQ49 451 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 PSAPL1Q6NUJ1 521 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 PIGZQ86VD9 579 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 SYT12Q8IV01 421 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 TATDN2Q93075 761 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 GABRG3Q99928 467 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 CD248Q9HCU0 757 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 TMEM74BQ9NUR3 256 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 CALCOCO1Q9P1Z2 691 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 RASAL2Q9UJF2 1139 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 ZNF510Q9Y2H8 683 aa20.64■□□□□ 0.89
PABPC1-215ENST00000520804 TPRP12270 2363 aaKnown RBP20.64■□□□□ 0.89
PABPC1-215ENST00000520804 ACACBO00763 2458 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 DPP6P42658 865 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 COG7P83436 770 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 SHC2P98077 582 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 CBWD6Q4V339 395 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 COBLL1Q53SF7 1204 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 TRIM61Q5EBN2 209 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 RAB41Q5JT25 222 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 CBWD3Q5JTY5 395 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 CBWD5Q5RIA9 395 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 ZNF658Q5TYW1 1059 aaPredicted RBP20.63■□□□□ 0.89
PABPC1-215ENST00000520804 LYSMD4Q5XG99 296 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 SLC36A4Q6YBV0 504 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 ZC3H3Q8IXZ2 948 aaKnown RBP20.63■□□□□ 0.89
PABPC1-215ENST00000520804 ARHGAP18Q8N392 663 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 ANKRD52Q8NB46 1076 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 IPO4Q8TEX9 1081 aaKnown RBP20.63■□□□□ 0.89
PABPC1-215ENST00000520804 BHMTQ93088 406 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 P2RY11Q96G91 374 aa20.63■□□□□ 0.89
PABPC1-215ENST00000520804 PLK2Q9NYY3 685 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms