RNA–Protein interactions for RNA: ENST00000520790.1

PCDHGB6-201, Transcript of protocadherin gamma subfamily B, 6, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB6, Length 4,599 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6-201ENST00000520790 PCDHA11Q9Y5I1 949 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 APRTP07741 180 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 RRM1P23921 792 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 CLK2P49760 499 aaKnown RBP12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 GTF2A1P52655 376 aaPredicted RBP12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 CDR2Q01850 454 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 SZRD1Q7Z422 152 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 OR14C36Q8NHC7 312 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 SPATA18Q8TC71 538 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 SNX27Q96L92 541 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 FIS1Q9Y3D6 152 aa12.26□□□□□ -0.45
PCDHGB6-201ENST00000520790 ALDH3A1P30838 453 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 NCKAP1LP55160 1127 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 NNTQ13423 1086 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 CCDC6Q16204 474 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 TPGS2Q68CL5 300 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 C1orf127Q8N9H9 656 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 ZSCAN18Q8TBC5 510 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 TMEM175Q9BSA9 504 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 TRIM54Q9BYV2 358 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 ACP6Q9NPH0 428 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 HOMER3Q9NSC5 361 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 L1RE1Q9UN81 338 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 TRAF3IP3Q9Y228 551 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 MIF4GDA9UHW6 222 aaKnown RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 IGSF6O95976 241 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 ARSHQ5FYA8 562 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 ZNF461Q8TAF7 563 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 PHOSPHO2Q8TCD6 241 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 WRAP73Q9P2S5 460 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 A0A1W2PQH9 124 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 MSI1O43347 362 aaKnown RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 NDUFS3O75489 264 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 MAP4P27816 1152 aaKnown RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 CORO1AP31146 461 aaKnown RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 TEAD2Q15562 447 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 NFIL3Q16649 462 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 PTRHD1Q6GMV3 140 aaKnown RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 BBOF1Q8ND07 529 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 BPIFB1Q8TDL5 484 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 C1orf54Q8WWF1 131 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 DNAJC19Q96DA6 116 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 PPP1R16AQ96I34 528 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 EVA1BQ9NVM1 165 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 LCMT1Q9UIC8 334 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 MARF1Q9Y4F3 1742 aaKnown RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 TEX28O15482 410 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 SLC5A3P53794 718 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 APBA1Q02410 837 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 IL17AQ16552 155 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 CBWD6Q4V339 395 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 CBWD3Q5JTY5 395 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 CBWD5Q5RIA9 395 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 MFSD4BQ5TF39 518 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 RAB44Q7Z6P3 723 aaPredicted RBP12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 HDDC3Q8N4P3 179 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 SLC35C1Q96A29 364 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 CNPY3Q9BT09 278 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 EBF3Q9H4W6 596 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 SFXN1Q9H9B4 322 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 RGS18Q9NS28 235 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 TRIM10Q9UDY6 481 aa12.25□□□□□ -0.45
PCDHGB6-201ENST00000520790 RBAK-RBAKDNI3L0D1 243 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 STAT4Q14765 748 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 CCDC121Q6ZUS5 278 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 ARHGEF19Q8IW93 802 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 DEFB119Q8N690 84 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 ANKRD52Q8NB46 1076 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 USP13Q92995 863 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 CFAP57Q96MR6 1250 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 PCYT2Q99447 389 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 COLQQ9Y215 455 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 WNT6Q9Y6F9 365 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 EP300Q09472 2414 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 NUP98P52948 1817 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 GRM6O15303 877 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 ESRRBO95718 433 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 CST3P01034 146 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 POU5F1BQ06416 359 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 PPP1R26Q5T8A7 1209 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 MARC1Q5VT66 337 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 FAM46CQ5VWP2 391 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 TTI2Q6NXR4 508 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 HJURPQ8NCD3 748 aaPredicted RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 MYCBPAPQ8TBZ2 947 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 ATXN7L3BQ96GX2 97 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 SRPK1Q96SB4 655 aaKnown RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 GPR62Q9BZJ7 368 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 SMG9Q9H0W8 520 aaKnown RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 RBM22Q9NW64 420 aaKnown RBP eCLIP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 INVSQ9Y283 1065 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 LRP5O75197 1615 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 NDUFAB1O14561 156 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 ADAMTS3O15072 1205 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 RBP3P10745 1247 aa12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 MAT2AP31153 395 aaKnown RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 PMS1P54277 932 aaKnown RBP12.24□□□□□ -0.45
PCDHGB6-201ENST00000520790 HHATQ5VTY9 493 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms