RNA–Protein interactions for RNA: ENST00000520348.5

SNHG6-201, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 2 BASIC

Gene SNHG6, Length 648 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-201ENST00000520348 SCD5Q86SK9 330 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 DDX53Q86TM3 631 aaKnown RBP16.71■□□□□ 0.27
SNHG6-201ENST00000520348 NUP93Q8N1F7 819 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 CCDC185Q8N715 623 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 KCTD6Q8NC69 237 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 FBXO22Q8NEZ5 403 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 SCAMP5Q8TAC9 235 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 SP7Q8TDD2 431 aaPredicted RBP16.71■□□□□ 0.27
SNHG6-201ENST00000520348 GRK7Q8WTQ7 553 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 ATG4AQ8WYN0 398 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 CAVIN3Q969G5 261 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 TRIM51Q9BSJ1 452 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 FAM129AQ9BZQ8 928 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 CRISPLD1Q9H336 500 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 FAM114A2Q9NRY5 505 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 SPG21Q9NZD8 308 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 STK39Q9UEW8 545 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 FEZ2Q9UHY8 353 aaPredicted RBP16.71■□□□□ 0.27
SNHG6-201ENST00000520348 AP4E1Q9UPM8 1137 aa16.71■□□□□ 0.27
SNHG6-201ENST00000520348 DRG1Q9Y295 367 aaKnown RBP16.71■□□□□ 0.27
SNHG6-201ENST00000520348 MYO16Q9Y6X6 1858 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 WDR27A2RRH5 827 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 APOC4-APOC2K7ER74 178 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 M0QYT0 321 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 SEC31AO94979 1220 aaKnown RBP16.7■□□□□ 0.26
SNHG6-201ENST00000520348 F9P00740 461 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 APOC2P02655 101 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 FGBP02675 491 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 CPB1P15086 417 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 GBP1P32455 592 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 CARSP49589 748 aaKnown RBP16.7■□□□□ 0.26
SNHG6-201ENST00000520348 CDR1P51861 262 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 EPHB4P54760 987 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 VCPP55072 806 aaKnown RBP16.7■□□□□ 0.26
SNHG6-201ENST00000520348 DEUP1Q05D60 604 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 PTK6Q13882 451 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 TFDP2Q14188 446 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 LLGL1Q15334 1064 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 TMEM240Q5SV17 173 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 ZFYVE27Q5T4F4 411 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 MSANTD2Q6P1R3 559 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 SCYL2Q6P3W7 929 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 RNF19BQ6ZMZ0 732 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 ZNF365Q70YC5 407 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 TMCO2Q7Z6W1 182 aaPredicted RBP16.7■□□□□ 0.26
SNHG6-201ENST00000520348 SCN4BQ8IWT1 228 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 TTC9BQ8N6N2 239 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 PQLC3Q8N755 202 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 ATL2Q8NHH9 583 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 DQX1Q8TE96 717 aaKnown RBP16.7■□□□□ 0.26
SNHG6-201ENST00000520348 BADQ92934 168 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 TMEM169Q96HH4 297 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 TTLL2Q9BWV7 592 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 FUT8Q9BYC5 575 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 SMOC2Q9H3U7 446 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 FBXO44Q9H4M3 255 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 ABCC13Q9NSE7 274 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 PIGVQ9NUD9 493 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 GPATCH2LQ9NWQ4 482 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 UTP11Q9Y3A2 253 aaKnown RBP16.7■□□□□ 0.26
SNHG6-201ENST00000520348 CDY1Q9Y6F8 540 aa16.7■□□□□ 0.26
SNHG6-201ENST00000520348 GREB1Q4ZG55 1949 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 ESYT3A0FGR9 886 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 MAP2K7O14733 419 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 CAPN9O14815 690 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 ADAM12O43184 909 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 CST8O60676 142 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 ABLIM3O94929 683 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 RTN3O95197 1032 aaPredicted RBP16.69■□□□□ 0.26
SNHG6-201ENST00000520348 ITGAVP06756 1048 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 NCAM1P13591 858 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 TGM2P21980 687 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 KCNJ1P48048 391 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 GLUD2P49448 558 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 CXCR3P49682 368 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 GPR15P49685 360 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 YWHAGP61981 247 aaKnown RBP eCLIP16.69■□□□□ 0.26
SNHG6-201ENST00000520348 RPL10AP62906 217 aaKnown RBP16.69■□□□□ 0.26
SNHG6-201ENST00000520348 SEMA3BQ13214 749 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 TRADDQ15628 312 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 KAZNQ674X7 775 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 TPGS2Q68CL5 300 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 OTOP2Q7RTS6 562 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 TAC4Q86UU9 113 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 FAM131BQ86XD5 332 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 CCDC105Q8IYK2 499 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 ARHGAP18Q8N392 663 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 PCDH19Q8TAB3 1148 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 RIN2Q8WYP3 895 aaPredicted RBP16.69■□□□□ 0.26
SNHG6-201ENST00000520348 HERVK_113Q902F9 699 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 CLP1Q92989 425 aaKnown RBP16.69■□□□□ 0.26
SNHG6-201ENST00000520348 PGLYRP2Q96PD5 576 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 KCTD15Q96SI1 283 aaPredicted RBP16.69■□□□□ 0.26
SNHG6-201ENST00000520348 YME1L1Q96TA2 773 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 CLSTN3Q9BQT9 956 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 GRHL1Q9NZI5 618 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 PRKAG2Q9UGJ0 569 aa16.69■□□□□ 0.26
SNHG6-201ENST00000520348 AFF4Q9UHB7 1163 aaKnown RBP16.69■□□□□ 0.26
SNHG6-201ENST00000520348 IRAK2O43187 625 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms