RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 PIGVQ9NUD9 493 aa17.76■□□□□ 0.43
TSNARE1-205ENST00000520166 PI4K2BG5E9Z4 385 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 LINC01565O15544 149 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 ZDHHC11BP0C7U3 371 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 RARGP13631 454 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 PTPN9P43378 593 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 GRIN2CQ14957 1233 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 ARCQ7LC44 396 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 BNIPLQ7Z465 357 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 FAM131BQ86XD5 332 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CCDC185Q8N715 623 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 PKNOX2Q96KN3 472 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 OSBPL9Q96SU4 736 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 IL21Q9HBE4 155 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CDH22Q9UJ99 828 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 SNX12Q9UMY4 172 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 KIF2AO00139 706 aaPredicted RBP17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 KCNK3O14649 394 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 TRUB2O95900 331 aaKnown RBP17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CSH1P0DML2 217 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CSH2P0DML3 217 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 PYGMP11217 842 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 MAN1A1P33908 653 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CTNNA1P35221 906 aaKnown RBP17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CCR2P41597 374 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 NTHL1P78549 312 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CA9Q16790 459 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 DUSP6Q16828 381 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 PPM1LQ5SGD2 360 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 GAREM2Q75VX8 874 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 TMC8Q8IU68 726 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 MRPL38Q96DV4 380 aaKnown RBP17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 LRCH3Q96II8 777 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CAPZA3Q96KX2 299 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 MYRFLQ96LU7 910 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 ZNF512Q96ME7 567 aaPredicted RBP17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 FAM161BQ96MY7 647 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 CORO1BQ9BR76 489 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 HERPUD2Q9BSE4 406 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 ABCC13Q9NSE7 274 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 USP18Q9UMW8 372 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 PCDHA3Q9Y5H8 950 aa17.75■□□□□ 0.43
TSNARE1-205ENST00000520166 MTCL1Q9Y4B5 1905 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 C2orf78A6NCI8 922 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 ZNF840PA6NDX5 716 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 SART1O43290 800 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 ZMYND10O75800 440 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 LRG1P02750 347 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 CD48P09326 243 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 SLC1A1P43005 524 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 TAF12Q16514 161 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 LRIT3Q3SXY7 679 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 ZC3H12AQ5D1E8 599 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 PDE12Q6L8Q7 609 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 CCDC149Q6ZUS6 474 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 RAPGEF5Q92565 580 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 SLC22A12Q96S37 553 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 CYP2S1Q96SQ9 504 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 APOL5Q9BWW9 433 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 RNF38Q9H0F5 515 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 WDR6Q9NNW5 1121 aaKnown RBP17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 MAFFQ9ULX9 164 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 SNX10Q9Y5X0 201 aa17.74■□□□□ 0.43
TSNARE1-205ENST00000520166 PDE2AO00408 941 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 RNF8O76064 485 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 ENDOD1O94919 500 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 F11P03951 625 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 RARAP10276 462 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 CTNNA2P26232 953 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 HYAL1Q12794 435 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 EFEMP1Q12805 493 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 KCNC3Q14003 757 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 VEPH1Q14D04 833 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 KCTD19Q17RG1 926 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 TCEAL5Q5H9L2 206 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 STXBP5Q5T5C0 1151 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 POTEHQ6S545 545 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 PYROXD2Q8N2H3 581 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 LRRN4CLQ8ND94 238 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 HSPH1Q92598 858 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 GOLGA1Q92805 767 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 RNF25Q96BH1 459 aaPredicted RBP17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 TCEAL4Q96EI5 215 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 CALR3Q96L12 384 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 TLR8Q9NR97 1041 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 DDIT4Q9NX09 232 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 DNMT3BQ9UBC3 853 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 SAR1BQ9Y6B6 198 aa17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 PRRC2BQ5JSZ5 2229 aaKnown RBP17.73■□□□□ 0.43
TSNARE1-205ENST00000520166 GLP2RO95838 553 aa17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 CYP4F8P98187 520 aa17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 DEUP1Q05D60 604 aa17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 ADGRE1Q14246 886 aa17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 MIB1Q86YT6 1006 aa17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 ZNF707Q96C28 371 aaPredicted RBP17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 TRMT2BQ96GJ1 504 aaKnown RBP17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 SLITRK1Q96PX8 696 aa17.72■□□□□ 0.43
TSNARE1-205ENST00000520166 LMAN2LQ9H0V9 348 aa17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms