RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 RRN3Q9NYV6 651 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 NLRC5Q86WI3 1866 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 MYCP01106 439 aaPredicted RBP28.04■■■□□ 2.08
COL13A1-212ENST00000520133 USP17L7P0C7H9 530 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 CYP2F1P24903 491 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 AGBL2Q5U5Z8 902 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 C1orf228Q6PIY5 440 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 NPNTQ6UXI9 565 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 RNF208Q9H0X6 261 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 NRDE2Q9H7Z3 1164 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 FZD10Q9ULW2 581 aa28.04■■■□□ 2.08
COL13A1-212ENST00000520133 YJEFN3A6XGL0 299 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 E7ENQ6 273 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 RABGGTBP53611 331 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 GDF10P55107 478 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 DEUP1Q05D60 604 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 GPNMBQ14956 572 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 MTFR1Q15390 333 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 SYPL2Q5VXT5 272 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 HFE2Q6ZVN8 426 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 RELL1Q8IUW5 271 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 RHOBTB2Q9BYZ6 727 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 TMLHEQ9NVH6 421 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 CALCOCO1Q9P1Z2 691 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 RCOR3Q9P2K3 495 aaPredicted RBP28.03■■■□□ 2.08
COL13A1-212ENST00000520133 SHOC2Q9UQ13 582 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 NAALADL1Q9UQQ1 740 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 TET1Q8NFU7 2136 aa28.03■■■□□ 2.08
COL13A1-212ENST00000520133 H7C0C1 242 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 LTFP02788 710 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 ARL4AP40617 200 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 ATP5OP48047 213 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 LMAN1P49257 510 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 LRRTM3Q86VH5 581 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 ZC3H18Q86VM9 953 aaKnown RBP28.02■■■□□ 2.08
COL13A1-212ENST00000520133 SPATA2LQ8IUW3 424 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-212ENST00000520133 UNC45BQ8IWX7 931 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 SCML4Q8N228 414 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 KCTD15Q96SI1 283 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-212ENST00000520133 TMEM209Q96SK2 561 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 C10orf88Q9H8K7 445 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 PRDM16Q9HAZ2 1276 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 MTMR10Q9NXD2 777 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 LRFN2Q9ULH4 789 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 TTC3P53804 2025 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 CFAP69A5D8W1 941 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 PQBP1O60828 265 aaKnown RBP28.02■■■□□ 2.08
COL13A1-212ENST00000520133 TADA2AO75478 443 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 SHBGP04278 402 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 CCL5P13501 91 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 RNASEH2BQ5TBB1 312 aaKnown RBP28.02■■■□□ 2.08
COL13A1-212ENST00000520133 OTUD1Q5VV17 481 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-212ENST00000520133 SH2D3CQ8N5H7 860 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 FAM71DQ8N9W8 422 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 SLC9A7Q96T83 725 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 PRG3Q9Y2Y8 225 aaPredicted RBP28.02■■■□□ 2.08
COL13A1-212ENST00000520133 HEY1Q9Y5J3 304 aa28.02■■■□□ 2.08
COL13A1-212ENST00000520133 TTC4O95801 387 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 FYNP06241 537 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 AIF1P55008 147 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 NME3Q13232 169 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 SLC7A14Q8TBB6 771 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 TMEM109Q9BVC6 243 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 ZKSCAN7Q9P0L1 754 aaPredicted RBP28.01■■■□□ 2.07
COL13A1-212ENST00000520133 BCCIPQ9P287 314 aaKnown RBP eCLIP28.01■■■□□ 2.07
COL13A1-212ENST00000520133 DNAJB4Q9UDY4 337 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 PATJQ8NI35 1801 aa28.01■■■□□ 2.07
COL13A1-212ENST00000520133 SYNJ2BP-COX16A0A087WUM0 186 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 HOXA2O43364 376 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 OAZ2O95190 189 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 NCAM1P13591 858 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 ACTN2P35609 894 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 PITX1P78337 314 aaPredicted RBP28■■■□□ 2.07
COL13A1-212ENST00000520133 PM20D1Q6GTS8 502 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 PPIL6Q8IXY8 311 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 CSPG4P5Q96PW8 444 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 RBM15Q96T37 977 aaKnown RBP eCLIP28■■■□□ 2.07
COL13A1-212ENST00000520133 TRIM62Q9BVG3 475 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 DNAJC17Q9NVM6 304 aaKnown RBP28■■■□□ 2.07
COL13A1-212ENST00000520133 COX16Q9P0S2 106 aa28■■■□□ 2.07
COL13A1-212ENST00000520133 SMAPO00193 183 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 SYN3O14994 580 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 RPL22P35268 128 aaKnown RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 NR2C2P49116 596 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 CTCFP49711 727 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 DCP1BQ8IZD4 617 aaKnown RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 PGAP3Q96FM1 320 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 TANC1Q9C0D5 1861 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 F9P00740 461 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 NR1D1P20393 614 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 EFHC2Q5JST6 749 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 C6orf118Q5T5N4 469 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 PWWP2AQ96N64 755 aa27.99■■■□□ 2.07
COL13A1-212ENST00000520133 ROPN1BQ9BZX4 212 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 ROPN1Q9HAT0 212 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 CWC15Q9P013 229 aaKnown RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 FARP1Q9Y4F1 1045 aaPredicted RBP27.99■■■□□ 2.07
COL13A1-212ENST00000520133 SCN5AQ14524 2016 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 A6NNZ2 444 aa27.98■■■□□ 2.07
COL13A1-212ENST00000520133 PARNO95453 639 aaKnown RBP27.98■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms