RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 MZT2BQ6NZ67 158 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 SYT13Q7L8C5 426 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 CAND1Q86VP6 1230 aaKnown RBP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 LNX2Q8N448 690 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 TTC9BQ8N6N2 239 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 DDX51Q8N8A6 666 aaKnown RBP eCLIP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 SLC22A17Q8WUG5 538 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 EIF3CQ99613 913 aaKnown RBP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 REEP2Q9BRK0 252 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 ALG8Q9BVK2 526 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 GPR63Q9BZJ6 419 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 SMC4Q9NTJ3 1288 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 FBXO28Q9NVF7 368 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 KCND3Q9UK17 655 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 CNOT11Q9UKZ1 510 aaKnown RBP6□□□□□ -1.45
HMGB1P46-201ENST00000520062 DNAJC16Q9Y2G8 782 aa6□□□□□ -1.45
HMGB1P46-201ENST00000520062 LOC105369274A0A096LPK9 316 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 LOC102723532A0A0G2JNH3 316 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 F5H0A9 414 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 SEPT4O43236 478 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 LPXNO60711 386 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 NDUFA10O95299 355 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 CENPBP07199 599 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 HSP90AA1P07900 732 aaKnown RBP5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 LAG3P18627 525 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 DRD1P21728 446 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 MMP8P22894 467 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 LIPAP38571 399 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 HNRNPMP52272 730 aaKnown RBP eCLIP5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 NR1H2P55055 460 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 FOXD4Q12950 439 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 SEMA3BQ13214 749 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 NRN1LQ496H8 165 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 NAA35Q5VZE5 725 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 ATG16L1Q676U5 607 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 VWA1Q6PCB0 445 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 LCNL1Q6ZST4 164 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 TICAM2Q86XR7 235 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 OR4N4Q8N0Y3 316 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 SLC2A12Q8TD20 617 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 SSH3Q8TE77 659 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 LPIN2Q92539 896 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 FKBP10Q96AY3 582 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 KTI12Q96EK9 354 aaPredicted RBP5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 REXO5Q96IC2 774 aaKnown RBP5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 VPS50Q96JG6 964 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 PGBD1Q96JS3 809 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 FAR2Q96K12 515 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 DEF6Q9H4E7 631 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 CCDC134Q9H6E4 229 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 NRDE2Q9H7Z3 1164 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 TBCCD1Q9NVR7 557 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 PARPBPQ9NWS1 579 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 BAG5Q9UL15 447 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 GABRQQ9UN88 632 aa5.99□□□□□ -1.45
HMGB1P46-201ENST00000520062 FER1L4A9Z1Z3 1794 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 MBD3L5A6NJ08 208 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 FAM20BO75063 409 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 NXPH3O95157 252 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 SPDEFO95238 335 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 DDX58O95786 925 aaKnown RBP5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 PDHA1P08559 390 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 DCTN1Q14203 1278 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 AAK1Q2M2I8 961 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 KRT27Q7Z3Y8 459 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 MAVSQ7Z434 540 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZNF276Q8N554 614 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 MYCBPAPQ8TBZ2 947 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 RFFLQ8WZ73 363 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 HVCN1Q96D96 273 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 PTCD3Q96EY7 689 aaKnown RBP5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 WDYHV1Q96HA8 205 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 MECRQ9BV79 373 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 AGXT2Q9BYV1 514 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 OSBPL5Q9H0X9 879 aaPredicted RBP5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 PREBQ9HCU5 417 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 TBX20Q9UMR3 447 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 AFG3L2Q9Y4W6 797 aa5.98□□□□□ -1.45
HMGB1P46-201ENST00000520062 VWA3AA6NCI4 1184 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 HNRNPRO43390 633 aaKnown RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 VNN1O95497 513 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 PEX11BO96011 259 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 LDHCP07864 332 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 IL6RP08887 468 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 IFIT1P09914 478 aaKnown RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 ATP1A3P13637 1013 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 ADRA1DP25100 572 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 YY1P25490 414 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 ZFP36P26651 326 aaKnown RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 GKP32189 559 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 RBM6P78332 1123 aaKnown RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 GUCY1B3Q02153 619 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 SF3B3Q15393 1217 aaKnown RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 TBCCQ15814 346 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 ANO7Q6IWH7 933 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 TBC1D1Q86TI0 1168 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 FSIP1Q8NA03 581 aa5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 NGDNQ8NEJ9 315 aaKnown RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 SLC25A43Q8WUT9 341 aaPredicted RBP5.97□□□□□ -1.45
HMGB1P46-201ENST00000520062 CTHRC1Q96CG8 243 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms