RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 MGAT4CQ9UBM8 478 aa7.15□□□□□ -1.26
PTPN12-213ENST00000519553 LGALS16A8MUM7 142 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 CA12O43570 354 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 ASNA1O43681 348 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 PROP1O75360 226 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 JTBO76095 146 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 APEHP13798 732 aaKnown RBP7.14□□□□□ -1.27
PTPN12-213ENST00000519553 NPPBP16860 134 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 RENBPP51606 427 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 GRM1Q13255 1194 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 TMEM196Q5HYL7 178 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 FAM90A2PQ658T7 463 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 PGBD2Q6P3X8 592 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 TRIM72Q6ZMU5 477 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 BCDIN3DQ7Z5W3 292 aaKnown RBP7.14□□□□□ -1.27
PTPN12-213ENST00000519553 ADGRG3Q86Y34 549 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 MYLK4Q86YV6 388 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-213ENST00000519553 RASGRP3Q8IV61 690 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 CLASRPQ8N2M8 674 aaKnown RBP7.14□□□□□ -1.27
PTPN12-213ENST00000519553 ENAHQ8N8S7 591 aaPredicted RBP7.14□□□□□ -1.27
PTPN12-213ENST00000519553 PNPLA1Q8N8W4 532 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 FAM71BQ8TC56 605 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 STYXQ8WUJ0 223 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 ARPC5LQ9BPX5 153 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 NUDT22Q9BRQ3 303 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 HELLSQ9NRZ9 838 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 SH3BP4Q9P0V3 963 aa7.14□□□□□ -1.27
PTPN12-213ENST00000519553 AOX1Q06278 1338 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 H7C1Q1 480 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 J3KTA2 159 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 SUV39H1O43463 412 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 NTSR2O95665 410 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 NHLRC4P0CG21 123 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-213ENST00000519553 SRGAP2BP0DMP2 458 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 ELLP55199 621 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-213ENST00000519553 HOXA4Q00056 320 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-213ENST00000519553 ICA1Q05084 483 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 KCNJ12Q14500 433 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 PFKFB4Q16877 469 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 ZACNQ401N2 412 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 FAM83BQ5T0W9 1011 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 GGT6Q6P531 493 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 TLDC1Q6P9B6 456 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 PIK3AP1Q6ZUJ8 805 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 RD3Q7Z3Z2 195 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 ZG16BQ96DA0 208 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 EDC3Q96F86 508 aaKnown RBP7.13□□□□□ -1.27
PTPN12-213ENST00000519553 PRR11Q96HE9 360 aaPredicted RBP7.13□□□□□ -1.27
PTPN12-213ENST00000519553 VPS50Q96JG6 964 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 VPS45Q9NRW7 570 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 COX11Q9Y6N1 276 aa7.13□□□□□ -1.27
PTPN12-213ENST00000519553 KAT6AQ92794 2004 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 SPATA31A6Q5VVP1 1343 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 SYT5O00445 386 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 EXOC3O60645 756 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 SKAP2O75563 359 aaPredicted RBP7.12□□□□□ -1.27
PTPN12-213ENST00000519553 TNFRSF6BO95407 300 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 MBPP02686 304 aaPredicted RBP7.12□□□□□ -1.27
PTPN12-213ENST00000519553 ITGA5P08648 1049 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 DRD1P21728 446 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 GPC5P78333 572 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 TFF2Q03403 129 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 DNASE1L3Q13609 305 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 PTK2BQ14289 1009 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 SMN1Q16637 294 aaKnown RBP7.12□□□□□ -1.27
PTPN12-213ENST00000519553 DENND2CQ68D51 928 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 DAZAP1Q96EP5 407 aaKnown RBP7.12□□□□□ -1.27
PTPN12-213ENST00000519553 KAZALD1Q96I82 304 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 PRPF18Q99633 342 aaKnown RBP7.12□□□□□ -1.27
PTPN12-213ENST00000519553 EPS8L2Q9H6S3 715 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 SAP30LQ9HAJ7 183 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 PTPRHQ9HD43 1115 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 C11orf21Q9P2W6 132 aa7.12□□□□□ -1.27
PTPN12-213ENST00000519553 SCAF8Q9UPN6 1271 aaKnown RBP7.12□□□□□ -1.27
PTPN12-213ENST00000519553 TCRBV5S1A1TA0A578 114 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 PRAMEF2O60811 474 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 TAF5LO75529 589 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 TRAPPC10P48553 1259 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 DGKQP52824 942 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 NHLH1Q02575 133 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 TRIM14Q14142 442 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 PROSER3Q2NL68 480 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 TRIM71Q2Q1W2 868 aaKnown RBP7.11□□□□□ -1.27
PTPN12-213ENST00000519553 FCRLBQ6BAA4 426 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 LIN54Q6MZP7 749 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 MSANTD2Q6P1R3 559 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 P3H2Q8IVL5 708 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 RXFP3Q9NSD7 469 aa7.11□□□□□ -1.27
PTPN12-213ENST00000519553 GXYLT2A0PJZ3 443 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 USP1O94782 785 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 CSTBP04080 98 aaKnown RBP7.1□□□□□ -1.27
PTPN12-213ENST00000519553 ANXA6P08133 673 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 SERPINF1P36955 418 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 COPB1P53618 953 aaKnown RBP7.1□□□□□ -1.27
PTPN12-213ENST00000519553 TXNL4AP83876 142 aaKnown RBP7.1□□□□□ -1.27
PTPN12-213ENST00000519553 GRM4Q14833 912 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 ERAP2Q6P179 960 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 GATAD2AQ86YP4 633 aa7.1□□□□□ -1.27
PTPN12-213ENST00000519553 NGDNQ8NEJ9 315 aaKnown RBP7.1□□□□□ -1.27
PTPN12-213ENST00000519553 OR1N1Q8NGS0 311 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms