RNA–Protein interactions for RNA: ENST00000519054.5

SKP1-205, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 654 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-205ENST00000519054 KIAA0408Q6ZU52 694 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 CCDC28AQ8IWP9 274 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 GALNT16Q8N428 558 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 C12orf76Q8N812 135 aaPredicted RBP4.39□□□□□ -1.71
SKP1-205ENST00000519054 ABHD5Q8WTS1 349 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 EDC3Q96F86 508 aaKnown RBP4.39□□□□□ -1.71
SKP1-205ENST00000519054 PRR11Q96HE9 360 aaPredicted RBP4.39□□□□□ -1.71
SKP1-205ENST00000519054 PCDHAC1Q9H158 963 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 ARNT2Q9HBZ2 717 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 TMOD4Q9NZQ9 345 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 RNF7Q9UBF6 113 aa4.39□□□□□ -1.71
SKP1-205ENST00000519054 ZMYND8Q9ULU4 1186 aaPredicted RBP4.39□□□□□ -1.71
SKP1-205ENST00000519054 KCNU1A8MYU2 1149 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 RASA4BC9J798 803 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 CLIC1O00299 241 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 FYB1O15117 783 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 RASA4O43374 803 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 KCNQ3O43525 872 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 ATF7P17544 494 aaPredicted RBP4.38□□□□□ -1.71
SKP1-205ENST00000519054 DRD1P21728 446 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 MST1P26927 711 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 GABRB3P28472 473 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 TM4SF4P48230 202 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 ZNF81P51508 661 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 CCDC15Q0P6D6 951 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 PICALMQ13492 652 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 ACOX1Q15067 660 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 SLC35G1Q2M3R5 365 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 C4orf46Q504U0 113 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.38□□□□□ -1.71
SKP1-205ENST00000519054 CC2D1BQ5T0F9 858 aaKnown RBP4.38□□□□□ -1.71
SKP1-205ENST00000519054 MRNIPQ6NTE8 343 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 RANBP10Q6VN20 620 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 ZNF813Q6ZN06 617 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 C11orf96Q7Z7L8 435 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 DPP9Q86TI2 863 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 OR2C3Q8N628 320 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 FAM71DQ8N9W8 422 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 PNISRQ8TF01 805 aaKnown RBP4.38□□□□□ -1.71
SKP1-205ENST00000519054 SNX27Q96L92 541 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 ZNF778Q96MU6 729 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 SAP30LQ9HAJ7 183 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 ZNF70Q9UC06 446 aaPredicted RBP4.38□□□□□ -1.71
SKP1-205ENST00000519054 PHTF1Q9UMS5 762 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 ZNF804BA4D1E1 1349 aa4.38□□□□□ -1.71
SKP1-205ENST00000519054 FAM234BA2RU67 622 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 H3BNC9 293 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 ZSCAN9O15535 394 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 RNF8O76064 485 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 TMIGD3P0DMS9 266 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 IDEP14735 1019 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 PECAM1P16284 738 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 SFPQP23246 707 aaKnown RBP eCLIP4.37□□□□□ -1.71
SKP1-205ENST00000519054 GALNSP34059 522 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 AK2P54819 239 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 SSBP2P81877 361 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 SLC14A1Q13336 389 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 KLF9Q13886 244 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 SEC23BQ15437 767 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 AASDHQ4L235 1098 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 ARHGAP15Q53QZ3 475 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 USP17L6PQ6QN14 398 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 VSTM1Q6UX27 236 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.37□□□□□ -1.71
SKP1-205ENST00000519054 GLIS1Q8NBF1 620 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 OSR1Q8TAX0 266 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 ZNF566Q969W8 418 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 GRAMD1AQ96CP6 724 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 KAZALD1Q96I82 304 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 CCDC138Q96M89 665 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 CINPQ9BW66 212 aaPredicted RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 PRSS22Q9GZN4 317 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 DDX24Q9GZR7 859 aaKnown RBP eCLIP4.37□□□□□ -1.71
SKP1-205ENST00000519054 CERS4Q9HA82 394 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 VPS45Q9NRW7 570 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 GAR1Q9NY12 217 aaKnown RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 FNIP2Q9P278 1114 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 FZD4Q9ULV1 537 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 VPS4AQ9UN37 437 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 SCAF8Q9UPN6 1271 aaKnown RBP4.37□□□□□ -1.71
SKP1-205ENST00000519054 CEP83Q9Y592 693 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 PCDHB2Q9Y5E7 798 aa4.37□□□□□ -1.71
SKP1-205ENST00000519054 DSCR3O14972 297 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 CBFA2T3O75081 653 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 FGF18O76093 207 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 EGR1P18146 543 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 EEF1GP26641 437 aaKnown RBP4.36□□□□□ -1.71
SKP1-205ENST00000519054 SLC5A2P31639 672 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 RAE1P78406 368 aaKnown RBP4.36□□□□□ -1.71
SKP1-205ENST00000519054 BFSP2Q13515 415 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 DNASE1L3Q13609 305 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 DAZAP2Q15038 168 aaPredicted RBP4.36□□□□□ -1.71
SKP1-205ENST00000519054 TMEM196Q5HYL7 178 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 TMEM63BQ5T3F8 832 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 MORN5Q5VZ52 161 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 IZUMO3Q5VZ72 239 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 FBXO38Q6PIJ6 1188 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 C16orf71Q8IYS4 520 aaPredicted RBP4.36□□□□□ -1.71
SKP1-205ENST00000519054 BRI3BPQ8WY22 251 aa4.36□□□□□ -1.71
SKP1-205ENST00000519054 WDR24Q96S15 920 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms