RNA–Protein interactions for RNA: ENST00000518839.1

TRAPPC9-205, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-205ENST00000518839 APOC2P02655 101 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 FYNP06241 537 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 ZFXP17010 805 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 TUFMP49411 452 aaKnown RBP15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 ZNF135P52742 658 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 RABGGTBP53611 331 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 YWHAGP61981 247 aaKnown RBP eCLIP15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 MRPS25P82663 173 aaKnown RBP15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 DSG1Q02413 1049 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 CREMQ03060 361 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 NNTQ13423 1086 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 DPYSL3Q14195 570 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 LLGL1Q15334 1064 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 ARL13BQ3SXY8 428 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 BEND6Q5SZJ8 279 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 SYPL2Q5VXT5 272 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 BTBD8Q5XKL5 378 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 TPGS2Q68CL5 300 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 ZNF365Q70YC5 407 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 TAS1R1Q7RTX1 841 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 ANKS1BQ7Z6G8 1248 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 MON1AQ86VX9 555 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 FIBCD1Q8N539 461 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 SLC7A14Q8TBB6 771 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 CCHCR1Q8TD31 782 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 BADQ92934 168 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 PGLYRP2Q96PD5 576 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 RNF157Q96PX1 679 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 HTATIP2Q9BUP3 242 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 MTIF3Q9H2K0 278 aaKnown RBP15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 FAM204AQ9H8W3 233 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 PCDH18Q9HCL0 1135 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 IL37Q9NZH6 218 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 FZD10Q9ULW2 581 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 MAFFQ9ULX9 164 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 INSL6Q9Y581 213 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 CDY1Q9Y6F8 540 aa15.68■□□□□ 0.1
TRAPPC9-205ENST00000518839 NDC80O14777 642 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 LIASO43766 372 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 GJB5O95377 273 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 URODP06132 367 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 TFE3P19532 575 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 TGM2P21980 687 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 ARL4AP40617 200 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 PSEN1P49768 467 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 CDR1P51861 262 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 HTRA4P83105 476 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 RBM10P98175 930 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 ROR1Q01973 937 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 KRT17Q04695 432 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 BYSLQ13895 437 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 PPP1R7Q15435 360 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 MGAT5BQ3V5L5 792 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 EFHC2Q5JST6 749 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 OTUD1Q5VV17 481 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 DUPD1Q68J44 220 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 PRSS55Q6UWB4 352 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 RNF19BQ6ZMZ0 732 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 ATAD1Q8NBU5 361 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 PHOSPHO2Q8TCD6 241 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 CASKIN2Q8WXE0 1202 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 IFT81Q8WYA0 676 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 NKD2Q969F2 451 aaPredicted RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 FAF2Q96CS3 445 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 CCDC114Q96M63 670 aa15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 DHX35Q9H5Z1 703 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 AFF4Q9UHB7 1163 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 R3HDM2Q9Y2K5 976 aaKnown RBP15.67■□□□□ 0.1
TRAPPC9-205ENST00000518839 FAM92AA1XBS5 289 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 APOL1O14791 398 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 ITGAVP06756 1048 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 CD48P09326 243 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 YWHAQP27348 245 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 L1CAMP32004 1257 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 VCPP55072 806 aaKnown RBP15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 SCAPQ12770 1279 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 NME3Q13232 169 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 SNX1Q13596 522 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 PTK6Q13882 451 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 HLTFQ14527 1009 aaKnown RBP eCLIP15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 DDR2Q16832 855 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 RAB6CQ53S08 254 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 ANKRD20A8PQ5CZ79 823 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 ZC3H12AQ5D1E8 599 aaKnown RBP15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 RSPO2Q6UXX9 243 aaPredicted RBP15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 DENND5BQ6ZUT9 1274 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 C16orf59Q7L2K0 433 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 HDXQ7Z353 690 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 FAM131BQ86XD5 332 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 C7orf61Q8IZ16 206 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 CCDC185Q8N715 623 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 SCAMP5Q8TAC9 235 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 AENQ8WTP8 325 aaKnown RBP15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 RNF139Q8WU17 664 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 ATG4AQ8WYN0 398 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 HERVK_113Q902F9 699 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 CAVIN3Q969G5 261 aa15.66■□□□□ 0.1
TRAPPC9-205ENST00000518839 SEPT5Q99719 369 aaPredicted RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms