RNA–Protein interactions for RNA: ENST00000518359.5

TMEM55A-202, humanhuman

TSL 3

Gene TMEM55A, Length 867 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55A-202ENST00000518359 SLC5A3P53794 718 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 CAMK2BQ13554 666 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 TEAD4Q15561 434 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 SMAD1Q15797 465 aaKnown RBP12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 INAVAQ3KP66 663 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 WDR72Q3MJ13 1102 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 FUT11Q495W5 492 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 LRRC69Q6ZNQ3 347 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 TPGS1Q6ZTW0 290 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 STXBP4Q6ZWJ1 553 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 SV2BQ7L1I2 683 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 TRAPPC11Q7Z392 1133 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 LSM14AQ8ND56 463 aaKnown RBP12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 SCAMP5Q8TAC9 235 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 PIP4K2CQ8TBX8 421 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 UCMAQ8WVF2 138 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 PRCCQ92733 491 aaPredicted RBP12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 NXPE2Q96DL1 559 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 SMARCD1Q96GM5 515 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 CRELD1Q96HD1 420 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 MED10Q9BTT4 135 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 NUP58Q9BVL2 599 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 PCED1AQ9H1Q7 454 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 DPEP3Q9H4B8 488 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 KIAA1586Q9HCI6 787 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 TLR8Q9NR97 1041 aaKnown RBP12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 GMIPQ9P107 970 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 TENM4Q6N022 2769 aa12.37□□□□□ -0.43
TMEM55A-202ENST00000518359 FAM149AA5PLN7 773 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 WASH3PC4AMC7 463 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 PRB1P04280 392 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 TNNI1P19237 187 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 HNF1BP35680 557 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 GRIN1Q05586 938 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 FAM35AQ86V20 835 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 CBWD2Q8IUF1 395 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 WBP2Q969T9 261 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 DNAJC19Q96DA6 116 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 SIPA1Q96FS4 1042 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 KCNK16Q96T55 309 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 FBXO44Q9H4M3 255 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 IL37Q9NZH6 218 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 EIF2B4Q9UI10 523 aaKnown RBP12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 MAST4O15021 2626 aa12.36□□□□□ -0.43
TMEM55A-202ENST00000518359 COL5A1P20908 1838 aaPredicted RBP12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 A0A1B0GVT2 93 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 FAM92AA1XBS5 289 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 CAPN9O14815 690 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 RRP8O43159 456 aaKnown RBP12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 IGLV3-19P01714 112 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 ATP5C1P36542 298 aaKnown RBP12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 CCT8P50990 548 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 CDH8P55286 799 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 BNC1Q01954 994 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 TRPC3Q13507 836 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 CCDC157Q569K6 752 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 RRAGBQ5VZM2 374 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 ZNF605Q86T29 641 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 TMPRSS12Q86WS5 348 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 MARCH9Q86YJ5 346 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 TMPRSS6Q8IU80 811 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 SNX19Q92543 992 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 EPSTI1Q96J88 318 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 TNIP3Q96KP6 325 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 KLF16Q9BXK1 252 aaPredicted RBP12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 MKRN2Q9H000 416 aaKnown RBP12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 BTBD3Q9Y2F9 522 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 SLC27A6Q9Y2P4 619 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
TMEM55A-202ENST00000518359 KNL1Q8NG31 2342 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 CFAP46Q8IYW2 2715 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 CAPN8A6NHC0 703 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 GREM1O60565 184 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 AP1G2O75843 785 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 C1QL1O75973 258 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 CLSTN1O94985 981 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 STAU1O95793 577 aaKnown RBP12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 CISD3P0C7P0 127 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 PLA2G2AP14555 144 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 CSNK1EP49674 416 aaKnown RBP12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 ORC1Q13415 861 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 SF3A1Q15459 793 aaKnown RBP12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 SNRNP35Q16560 246 aaKnown RBP12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 PTPRNQ16849 979 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 C6orf118Q5T5N4 469 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 DHRS13Q6UX07 377 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 BRAPQ7Z569 592 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 C1orf216Q8TAB5 229 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 BAP1Q92560 729 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 BHMTQ93088 406 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 IGSF8Q969P0 613 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 SYAP1Q96A49 352 aaPredicted RBP12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 CYLDQ9NQC7 956 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 KRT82Q9NSB4 513 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 PANK4Q9NVE7 773 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 HSPBP1Q9NZL4 362 aa12.34□□□□□ -0.43
TMEM55A-202ENST00000518359 THAP10Q9P2Z0 257 aaPredicted RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms