RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 IGFBP4P22692 258 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 YWHAQP27348 245 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 ELF1P32519 619 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 SSR1P43307 286 aaKnown RBP11.04□□□□□ -0.64
PABPC1-203ENST00000517921 ATXN1P54253 815 aaKnown RBP11.04□□□□□ -0.64
PABPC1-203ENST00000517921 RWDD2BP57060 319 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 TWF1Q12792 350 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 TAF10Q12962 218 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 SLC25A52Q3SY17 297 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 TAC4Q86UU9 113 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 MON1AQ86VX9 555 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.04□□□□□ -0.64
PABPC1-203ENST00000517921 KATNAL2Q8IYT4 538 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 RASGEF1CQ8N431 466 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 DQX1Q8TE96 717 aaKnown RBP11.04□□□□□ -0.64
PABPC1-203ENST00000517921 PPM1EQ8WY54 764 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 EDEM1Q92611 657 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 MS4A14Q96JA4 679 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 CERS4Q9HA82 394 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 KLHL11Q9NVR0 708 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 OSER1Q9NX31 292 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 USP18Q9UMW8 372 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.04□□□□□ -0.64
PABPC1-203ENST00000517921 BRWD1Q9NSI6 2320 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 DOCK8Q8NF50 2099 aa11.04□□□□□ -0.64
PABPC1-203ENST00000517921 EPOPA6NHQ4 379 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 M0QYT0 321 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 CEP104O60308 925 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 LPXNO60711 386 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 SPATA31D3P0C874 917 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 PYGMP11217 842 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 NCAM1P13591 858 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 KLRC2P26717 231 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 RDXP35241 583 aaKnown RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ALDH1A3P47895 512 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 CLCN4P51793 760 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 PLD1Q13393 1074 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ZNF211Q13398 564 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 VEPH1Q14D04 833 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 HADHQ16836 314 aaKnown RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 SMTNL2Q2TAL5 461 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ATP13A4Q4VNC1 1196 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 BTBD8Q5XKL5 378 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 PDE12Q6L8Q7 609 aaKnown RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 AADACL2Q6P093 401 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 MSANTD2Q6P1R3 559 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 SPATA31D4Q6ZUB0 917 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ZNF572Q7Z3I7 529 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ARHGAP18Q8N392 663 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 KREMEN2Q8NCW0 462 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 LRRN4CLQ8ND94 238 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 SLC7A14Q8TBB6 771 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 GDPD5Q8WTR4 605 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ACSF2Q96CM8 615 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 PGAP3Q96FM1 320 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 TRMT2BQ96GJ1 504 aaKnown RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 MYRFLQ96LU7 910 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 NCAPGQ9BPX3 1015 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 CARD6Q9BX69 1037 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 LMAN2LQ9H0V9 348 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 SMOC2Q9H3U7 446 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ZWILCHQ9H900 591 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 ABCC13Q9NSE7 274 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 RRN3Q9NYV6 651 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 SMARCAL1Q9NZC9 954 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 PCSK1NQ9UHG2 260 aa11.03□□□□□ -0.64
PABPC1-203ENST00000517921 TTC7AQ9ULT0 858 aaPredicted RBP11.03□□□□□ -0.64
PABPC1-203ENST00000517921 MYO18AQ92614 2054 aaKnown RBP11.02□□□□□ -0.64
PABPC1-203ENST00000517921 MYOFQ9NZM1 2061 aa11.02□□□□□ -0.64
PABPC1-203ENST00000517921 PRPSAP2O60256 369 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 CLASP2O75122 1294 aaKnown RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 TADA3O75528 432 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 C1RP00736 705 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 KRT1P04264 644 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 C8AP07357 584 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 KRT7P08729 469 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 RARAP10276 462 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 PSEN1P49768 467 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 EPHB3P54753 998 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 CKAP4Q07065 602 aaKnown RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 EIF4EBP2Q13542 120 aaPredicted RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 SEL1L2Q5TEA6 688 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 CCDC149Q6ZUS6 474 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 ADGRD2Q7Z7M1 963 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 FAM131BQ86XD5 332 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 CCDC185Q8N715 623 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 EXD1Q8NHP7 514 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 ADAM32Q8TC27 787 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 ACTRT1Q8TDG2 376 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 MICAL1Q8TDZ2 1067 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 TEKT4Q8WW24 435 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 ARNTL2Q8WYA1 636 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 OVCA2Q8WZ82 227 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 RAPGEF5Q92565 580 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 PSMG2Q969U7 264 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 SLITRK1Q96PX8 696 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 SNRNP25Q9BV90 132 aaKnown RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 FAM204AQ9H8W3 233 aa11.02□□□□□ -0.65
PABPC1-203ENST00000517921 WDR6Q9NNW5 1121 aaKnown RBP11.02□□□□□ -0.65
PABPC1-203ENST00000517921 TLR8Q9NR97 1041 aaKnown RBP11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms