RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 PPP3CCP48454 512 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 PSEN1P49768 467 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 TUBP50607 506 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 KCNQ1P51787 676 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 RNASE9P60153 205 aaKnown RBP10.34□□□□□ -0.75
CLN8-202ENST00000517514 GPC5P78333 572 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 SLC7A9P82251 487 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 TCEAL1Q15170 157 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 CCDC14Q49A88 953 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 EFHC1Q5JVL4 640 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 HECTD3Q5T447 861 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 SH3PXD2AQ5TCZ1 1133 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 PTCRAQ6ISU1 281 aaPredicted RBP10.34□□□□□ -0.75
CLN8-202ENST00000517514 PPP1R2P3Q6NXS1 205 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 DNAJC24Q6P3W2 148 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 H2AFVQ71UI9 128 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 CPNE8Q86YQ8 564 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 ARFGAP1Q8N6T3 406 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 MSANTD4Q8NCY6 345 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 DQX1Q8TE96 717 aaKnown RBP10.34□□□□□ -0.75
CLN8-202ENST00000517514 FAM149B1Q96BN6 582 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 NECTIN4Q96NY8 510 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 NPY6RQ99463 290 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 KLF16Q9BXK1 252 aaPredicted RBP10.34□□□□□ -0.75
CLN8-202ENST00000517514 SYNCQ9H7C4 482 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 POPDC2Q9HBU9 364 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 OSGEPQ9NPF4 335 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 ABCC13Q9NSE7 274 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 TRIM10Q9UDY6 481 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 SFMBT1Q9UHJ3 866 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 INTUQ9ULD6 942 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 STRIP2Q9ULQ0 834 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 CCL26Q9Y258 94 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 DUSP10Q9Y6W6 482 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 COL4A3Q01955 1670 aa10.34□□□□□ -0.75
CLN8-202ENST00000517514 SOBPA7XYQ1 873 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 C2CD4DB7Z1M9 353 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 I6L893 689 aaPredicted RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 PJA2O43164 708 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 SART1O43290 800 aaKnown RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 MSI1O43347 362 aaKnown RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 ENDOD1O94919 500 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 MYBL1P10243 752 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 KRT3P12035 628 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 LAMP2P13473 410 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 NCAM1P13591 858 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 DDX6P26196 483 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLN8-202ENST00000517514 WEE1P30291 646 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 NOS2P35228 1153 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 ARHGAP25P42331 645 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 MATKP42679 507 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 ATXN1P54253 815 aaKnown RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 SNX16P57768 344 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 EFEMP1Q12805 493 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 C15orf59Q2T9L4 293 aaPredicted RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 FAM78AQ5JUQ0 283 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 C10orf76Q5T2E6 689 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 ARTNQ5T4W7 220 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 BTBD8Q5XKL5 378 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 KLHDC10Q6PID8 442 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 TAC4Q86UU9 113 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 CMTM8Q8IZV2 173 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 ARHGAP18Q8N392 663 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 CCDC112Q8NEF3 446 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 ADAM32Q8TC27 787 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 RXFP2Q8WXD0 754 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 MRPS31Q92665 395 aaKnown RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 CENPIQ92674 756 aaPredicted RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 ANP32BQ92688 251 aaKnown RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 USP13Q92995 863 aaPredicted RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 SLC39A13Q96H72 371 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 BTBD6Q96KE9 485 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 CFAP57Q96MR6 1250 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 ASB16Q96NS5 453 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 MCEEQ96PE7 176 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 TBCBQ99426 244 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 RPP25Q9BUL9 199 aaKnown RBP10.33□□□□□ -0.76
CLN8-202ENST00000517514 SELENOOQ9BVL4 669 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 PLA2G2FQ9BZM2 168 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 SMOC2Q9H3U7 446 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 TRPC7Q9HCX4 862 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 ANLNQ9NQW6 1124 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 GKN1Q9NS71 199 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.33□□□□□ -0.76
CLN8-202ENST00000517514 CDH7Q9ULB5 785 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 PYCARDQ9ULZ3 195 aa10.33□□□□□ -0.76
CLN8-202ENST00000517514 MYOFQ9NZM1 2061 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 DPYSL4O14531 572 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 CCP110O43303 1012 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 MTA2O94776 668 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 IGLV3-27P01718 113 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 KLKB1P03952 638 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 RALAP11233 206 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 BMP1P13497 986 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 PFKLP17858 780 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 HDCP19113 662 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 SP100P23497 879 aaPredicted RBP10.32□□□□□ -0.76
CLN8-202ENST00000517514 VIPR2P41587 438 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 PTPN9P43378 593 aa10.32□□□□□ -0.76
CLN8-202ENST00000517514 VAV2P52735 878 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms