RNA–Protein interactions for RNA: ENST00000517460.2

IGHV3-30-2-201, Transcript of immunoglobulin heavy variable 3-30-2 (pseudogene), humanhuman

BASIC

Gene IGHV3-30-2, Length 355 nt, Biotype IG V pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-30-2-201ENST00000517460 F9P00740 461 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 FTLP02792 175 aaPredicted RBP11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SLC2A3P11169 496 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 NCAM1P13591 858 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PSMC3P17980 439 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SP100P23497 879 aaPredicted RBP11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 NOS2P35228 1153 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PFKPQ01813 784 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 TDGQ13569 410 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 ARHGAP29Q52LW3 1261 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 CCDC122Q5T0U0 273 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 STXBP5Q5T5C0 1151 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 DNAJC24Q6P3W2 148 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 ALKBH5Q6P6C2 394 aaKnown RBP11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 MON1BQ7L1V2 547 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 BHLHA9Q7RTU4 235 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 XYLT1Q86Y38 959 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 MFSD6LQ8IWD5 586 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 MCOLN2Q8IZK6 566 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SPC24Q8NBT2 197 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 C3orf20Q8ND61 904 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 FEZF2Q8TBJ5 459 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 BPIFB1Q8TDL5 484 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PLD4Q96BZ4 506 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 OTUB2Q96DC9 234 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 NCAPGQ9BPX3 1015 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SELENOOQ9BVL4 669 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 ISCUQ9H1K1 167 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 CCSER2Q9H7U1 834 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 NHEJ1Q9H9Q4 299 aaPredicted RBP11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PARVAQ9NVD7 372 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 ARHGAP20Q9P2F6 1191 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 TBC1D14Q9P2M4 693 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 LIMD1Q9UGP4 676 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 LCMT1Q9UIC8 334 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 RASAL2Q9UJF2 1139 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SH3BP1Q9Y3L3 701 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 CPQQ9Y646 472 aa11.3□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 OBSL1O75147 1896 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 E2F8A0AVK6 867 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 HEPACAM2A8MVW5 462 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 GOLGA8SH3BPF8 625 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 KRT3P12035 628 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 MATKP42679 507 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 RING1Q06587 406 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 EFEMP1Q12805 493 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 USP4Q13107 963 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PDGFRLQ15198 375 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SPA17Q15506 151 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 ACBD5Q5T8D3 534 aaPredicted RBP11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 NUGGCQ68CJ6 796 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 WDR59Q6PJI9 974 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SND1Q7KZF4 910 aaKnown RBP eCLIP11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 UNC45BQ8IWX7 931 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 UBALD2Q8IYN6 164 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 CCDC112Q8NEF3 446 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SH3RF2Q8TEC5 729 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 USP13Q92995 863 aaPredicted RBP11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 EXOC4Q96A65 974 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 ZSWIM3Q96MP5 696 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SLC2A13Q96QE2 648 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 CYP2S1Q96SQ9 504 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 UHRF1Q96T88 793 aaPredicted RBP11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 DDX50Q9BQ39 737 aaKnown RBP11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 TRMT61BQ9BVS5 477 aaKnown RBP11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SMOC2Q9H3U7 446 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 KCNK12Q9HB15 430 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SLC12A6Q9UHW9 1150 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SORCS3Q9UPU3 1222 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 NUMBLQ9Y6R0 609 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SZT2Q5T011 3432 aa11.29□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 CDH23Q9H251 3354 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 A0A087X0T9 212 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SLC12A8A0AV02 714 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SIGLEC16A6NMB1 481 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 TMCO5BA8MYB1 307 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 LEFTY2O00292 366 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 ZNF263O14978 683 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 CHADO15335 359 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PRAMEF12O95522 483 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 LATS1O95835 1130 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 APOEP02649 317 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 H2AFZP0C0S5 128 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 FAM228BP0C875 321 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 FECHP22830 423 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 FCARP24071 287 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 SDC4P31431 198 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 IFNAR2P48551 515 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 HARS2P49590 506 aaKnown RBP11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 AMPD2Q01433 879 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 FCHO2Q0JRZ9 810 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PTP4A2Q12974 167 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 NR1H3Q13133 447 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 MTF1Q14872 753 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 TRIP4Q15650 581 aaPredicted RBP11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 DCAF6Q58WW2 860 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 TANGO2Q6ICL3 276 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 DCUN1D2Q6PH85 259 aa11.28□□□□□ -0.6
IGHV3-30-2-201ENST00000517460 PARM1Q6UWI2 310 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms