RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 UBE2Q2Q8WVN8 375 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 ARHGEF3Q9NR81 526 aa11.34□□□□□ -0.59
TRIM41-209ENST00000515834 RBAK-RBAKDNI3L0D1 243 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 M0R3G1 203 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SRGNP10124 158 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 PYGMP11217 842 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 INSCQ1MX18 579 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 DNAL1Q4LDG9 190 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SLC45A4Q5BKX6 768 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SNAP47Q5SQN1 464 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 BARGINQ6ZT62 677 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 MTFMTQ96DP5 389 aaKnown RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CORO1BQ9BR76 489 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 UBE2OQ9C0C9 1292 aaKnown RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ARL2BPQ9Y2Y0 163 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ALG6Q9Y672 507 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 NR5A2O00482 541 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 FBXO21O94952 628 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 NFIAQ12857 509 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ATAD3BQ5T9A4 648 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 TRAPPC5Q8IUR0 188 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 GAS2L1Q99501 681 aaPredicted RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 REXO4Q9GZR2 422 aaKnown RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ABCG4Q9H172 646 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 FBXO44Q9H4M3 255 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 MRFAP1Q9Y605 127 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SMIM22K7EJ46 135 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CDH16O75309 829 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SPAG6O75602 509 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 AGTP01019 485 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 HLA-DQA2P01906 255 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CCR1P32246 355 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 NPTX2P47972 431 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CYP24A1Q07973 514 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ADIGQ0VDE8 80 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 DET1Q7L5Y6 550 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 NECAB2Q7Z6G3 386 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ADSSL1Q8N142 457 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 MCOLN3Q8TDD5 553 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 DPF2Q92785 391 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 UXTQ9UBK9 157 aaPredicted RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 VPS51Q9UID3 782 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SNX12Q9UMY4 172 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SOX13Q9UN79 622 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ARHGEF40Q8TER5 1519 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 FOXP2O15409 715 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 IGSF6O95976 241 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SLC2A4P14672 509 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 NUP62P37198 522 aaPredicted RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 GEMIN4P57678 1058 aaKnown RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ZNF544Q6NX49 715 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ADAM32Q8TC27 787 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 OLFM3Q96PB7 478 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 EPB41L4AQ9HCS5 686 aaPredicted RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 RBM22Q9NW64 420 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 GPRC5DQ9NZD1 345 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CTNNAL1Q9UBT7 734 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 TEX28O15482 410 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 RPLP2P05387 115 aaKnown RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CYP2A6P11509 494 aaPredicted RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 PSEN2P49810 448 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ATP12AP54707 1039 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 POU6F1Q14863 301 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 BTN2A1Q7KYR7 527 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 FAM124AQ86V42 546 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 JAMLQ86YT9 394 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 TMEM176AQ96HP8 235 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CNBD2Q96M20 576 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 BTBD9Q96Q07 612 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 MRPL9Q9BYD2 267 aaKnown RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 PRKAG3Q9UGI9 489 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 COQ6Q9Y2Z9 468 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 SNTNA6NMZ2 147 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 B2RBV5 119 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 OR6A2O95222 327 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 HNRNPCP07910 306 aaKnown RBP eCLIP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 RAB27AP51159 221 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CXCL9Q07325 125 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 EDRF1Q3B7T1 1238 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 CCDC144BQ3MJ40 725 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 RNF44Q7L0R7 432 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 STRA8Q7Z7C7 330 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 TRAPPC12Q8WVT3 735 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 ILKAPQ9H0C8 392 aaPredicted RBP11.33□□□□□ -0.6
TRIM41-209ENST00000515834 THAP2Q9H0W7 228 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 TNFSF13BQ9Y275 285 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 TECPR2O15040 1411 aa11.33□□□□□ -0.6
TRIM41-209ENST00000515834 RFX7Q2KHR2 1363 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 CNTNAP5Q8WYK1 1306 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 RAMP2O60895 175 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 PPP2R1BP30154 601 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 SERPINB8P50452 374 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 MYL6P60660 151 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 NFYCQ13952 458 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 RETSATQ6NUM9 610 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 LRRC8DQ7L1W4 858 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 PARP9Q8IXQ6 854 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 SH2D3CQ8N5H7 860 aa11.32□□□□□ -0.6
TRIM41-209ENST00000515834 ELMO3Q96BJ8 720 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 244.7 ms