RNA–Protein interactions for RNA: ENST00000515829.6

SMG7-215, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMG7, Length 5,629 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-215ENST00000515829 PTPN20Q4JDL3 420 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 BBS12Q6ZW61 710 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 LCA5Q86VQ0 697 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 AAASQ9NRG9 546 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 SLIT2O94813 1529 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 RNF103-CHMP3A0A140T963 221 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 LYPLA2O95372 231 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 TPI1P60174 286 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 TBL3Q12788 808 aaKnown RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 RINLQ6ZS11 566 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CD101Q93033 1021 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 VPS39Q96JC1 886 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 MMP19Q99542 508 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CADM1Q9BY67 442 aaKnown RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 UBP1Q9NZI7 540 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 AP4E1Q9UPM8 1137 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 AURKCQ9UQB9 309 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CDY2AQ9Y6F7 541 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CDY1Q9Y6F8 540 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 C19orf81C9J6K1 198 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 XPO1O14980 1071 aaKnown RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 CYP1A1P04798 512 aaPredicted RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 AMPD1P23109 780 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CDKN2BP42772 138 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CAPSQ13938 189 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 PDK2Q15119 407 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 ZC3H12AQ5D1E8 599 aaKnown RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 HIC2Q96JB3 615 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 EPB41L4BQ9H329 900 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 SMARCAD1Q9H4L7 1026 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 EBF2Q9HAK2 575 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 THAP1Q9NVV9 213 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 GOLGA8TH3BQL2 631 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 EEF2KO00418 725 aaKnown RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 USP12O75317 370 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 TPBGLP0DKB5 382 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 BLMHQ13867 455 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 TMEM259Q4ZIN3 620 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 AGBL3Q8NEM8 1001 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 GDPD5Q8WTR4 605 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 USP6NLQ92738 828 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 KLHL4Q9C0H6 718 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 PRMT7Q9NVM4 692 aaPredicted RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 KCNK4Q9NYG8 393 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 ZNF212Q9UDV6 495 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 RABGEF1Q9UJ41 708 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 ALS2Q96Q42 1657 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 A0A087WZ62 844 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 MOCS2O96007 188 aaPredicted RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 MGAT1P26572 445 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 TBCCQ15814 346 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 KLC3Q6P597 504 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 MTHFD1LQ6UB35 978 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 KCNT2Q6UVM3 1135 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 COLGALT1Q8NBJ5 622 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 FDXACB1Q9BRP7 624 aaPredicted RBP10.56□□□□□ -0.72
SMG7-215ENST00000515829 TXLNGYQ9BZA5 131 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 ETNK2Q9NVF9 386 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 KLK14Q9P0G3 267 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 FAM8A1Q9UBU6 413 aa10.56□□□□□ -0.72
SMG7-215ENST00000515829 CHD4Q14839 1912 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 PRR5-ARHGAP8B1AHC4 643 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 CPA3P15088 417 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 PAMP19021 973 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 TGM2P21980 687 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 ARHGAP8P85298 464 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 EML3Q32P44 896 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 KIAA1841Q6NSI8 718 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 STRA8Q7Z7C7 330 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 FAM83AQ86UY5 434 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 FIZ1Q96SL8 496 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 ZCWPW1Q9H0M4 648 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 DCDC2Q9UHG0 476 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 ZMYND8Q9ULU4 1186 aaPredicted RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 COQ4Q9Y3A0 265 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 SIPA1L3O60292 1781 aaPredicted RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 MARF1Q9Y4F3 1742 aaKnown RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 LACTBL1A8MY62 500 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 LRCH4O75427 683 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 WFS1O76024 890 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 ASS1P00966 412 aaKnown RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 RAG1P15918 1043 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 MLH1P40692 756 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 PTGER2P43116 358 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 ELMSAN1Q6PJG2 1045 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 THEM5Q8N1Q8 247 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 OR6P1Q8NGX9 317 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 SLC7A14Q8TBB6 771 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 L3MBTL3Q96JM7 780 aaPredicted RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 HERPUD2Q9BSE4 406 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 APPL1Q9UKG1 709 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 MRPL42Q9Y6G3 142 aaKnown RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 PKD1L3Q7Z443 1732 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 TWF2Q6IBS0 349 aaKnown RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 FBXO16Q8IX29 292 aaPredicted RBP10.55□□□□□ -0.72
SMG7-215ENST00000515829 GSTCDQ8NEC7 633 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 ELP3Q9H9T3 547 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 MAN1C1Q9NR34 630 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 MYH3P11055 1940 aa10.55□□□□□ -0.72
SMG7-215ENST00000515829 KCNK1O00180 336 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms