RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 SLC30A5Q8TAD4 765 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 EDEM1Q92611 657 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 IRF7Q92985 503 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 VCPIP1Q96JH7 1222 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 ZFRQ96KR1 1074 aaKnown RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 KLF16Q9BXK1 252 aaPredicted RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 COL25A1Q9BXS0 654 aaPredicted RBP12.45□□□□□ -0.42
SNF8-215ENST00000515572 TRPV5Q9NQA5 729 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 SMPD4Q9NXE4 827 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 ADAM22Q9P0K1 906 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 RASAL2Q9UJF2 1139 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 NUDT5Q9UKK9 219 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 SH3BP1Q9Y3L3 701 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 TICRRQ7Z2Z1 1910 aa12.45□□□□□ -0.42
SNF8-215ENST00000515572 TNFRSF10AO00220 468 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 DDX3XO00571 662 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNF8-215ENST00000515572 SLC9A3R1O14745 358 aaPredicted RBP12.44□□□□□ -0.42
SNF8-215ENST00000515572 ADCY5O95622 1261 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 FYNP06241 537 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 GDI1P31150 447 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 ADKP55263 362 aaKnown RBP12.44□□□□□ -0.42
SNF8-215ENST00000515572 ZXDBP98169 803 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 EFEMP1Q12805 493 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 PTP4A2Q12974 167 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 GRM2Q14416 872 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 PDGFRLQ15198 375 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 FAM102AQ5T9C2 384 aaPredicted RBP12.44□□□□□ -0.42
SNF8-215ENST00000515572 MON1BQ7L1V2 547 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 ARCQ7LC44 396 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 XYLT1Q86Y38 959 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 OLIG1Q8TAK6 271 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 DNASE1L2Q92874 299 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 TRIM11Q96F44 468 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 LRRC3BQ96PB8 259 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 SLC2A13Q96QE2 648 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 C11orf70Q9BRQ4 267 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.44□□□□□ -0.42
SNF8-215ENST00000515572 SMOC2Q9H3U7 446 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 BRD9Q9H8M2 597 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 TMEM51Q9NW97 253 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 CFAP97Q9P2B7 532 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 ARHGAP20Q9P2F6 1191 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 TBC1D14Q9P2M4 693 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 IMPACTQ9P2X3 320 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 HBS1LQ9Y450 684 aaKnown RBP12.44□□□□□ -0.42
SNF8-215ENST00000515572 NCOR1O75376 2440 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 COL4A2P08572 1712 aa12.44□□□□□ -0.42
SNF8-215ENST00000515572 SSU72P8A0A1W2PR75 194 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 GOLGA6L3A6NEY3 463 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 MDM4O15151 490 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 DAB1O75553 588 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 MATKP42679 507 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 GPC5P78333 572 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 ZXDAP98168 799 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 MAPK8IP2Q13387 824 aaPredicted RBP12.43□□□□□ -0.42
SNF8-215ENST00000515572 NNTQ13423 1086 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 TAF5Q15542 800 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 WDR59Q6PJI9 974 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 TTC16Q8NEE8 873 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 RIN3Q8TB24 985 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 OSCP1Q8WVF1 389 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 EDAQ92838 391 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 ATP2A3Q93084 1043 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 PLD4Q96BZ4 506 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 OTUB2Q96DC9 234 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 PIWIL1Q96J94 861 aaKnown RBP12.43□□□□□ -0.42
SNF8-215ENST00000515572 SERPINB11Q96P15 392 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 FAM83CQ9BQN1 747 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 DCLK3Q9C098 648 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 GKN1Q9NS71 199 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 DUS2Q9NX74 493 aaKnown RBP12.43□□□□□ -0.42
SNF8-215ENST00000515572 WNT16Q9UBV4 365 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 ADAMTS1Q9UHI8 967 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 SFMBT1Q9UHJ3 866 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 LSM7Q9UK45 103 aaKnown RBP12.43□□□□□ -0.42
SNF8-215ENST00000515572 NAALADL1Q9UQQ1 740 aa12.43□□□□□ -0.42
SNF8-215ENST00000515572 SPTBN5Q9NRC6 3674 aaKnown RBP12.42□□□□□ -0.42
SNF8-215ENST00000515572 SLC12A8A0AV02 714 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 GOLGA6L6A8MZA4 724 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 PI4K2BG5E9Z4 385 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 GOLGA8SH3BPF8 625 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 ARNTLO00327 626 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 NARSO43776 548 aaKnown RBP12.42□□□□□ -0.42
SNF8-215ENST00000515572 RTN2O75298 545 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 STC2O76061 302 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 FTLP02792 175 aaPredicted RBP12.42□□□□□ -0.42
SNF8-215ENST00000515572 PLEKP08567 350 aaPredicted RBP12.42□□□□□ -0.42
SNF8-215ENST00000515572 MYBL1P10243 752 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 NOS2P35228 1153 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 IFNAR2P48551 515 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 MLLT6P55198 1093 aaPredicted RBP12.42□□□□□ -0.42
SNF8-215ENST00000515572 RING1Q06587 406 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 TRIP4Q15650 581 aaPredicted RBP12.42□□□□□ -0.42
SNF8-215ENST00000515572 C2CD6Q53TS8 623 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 DCAF6Q58WW2 860 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 SYPL2Q5VXT5 272 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 HTR3DQ70Z44 454 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 MCOLN2Q8IZK6 566 aa12.42□□□□□ -0.42
SNF8-215ENST00000515572 DEFB106AQ8N104 65 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms