RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 BCAT1P54687 386 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 AASDHQ4L235 1098 aaPredicted RBP18.38■□□□□ 0.53
DDX41-217ENST00000515562 PLA2G2CQ5R387 149 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 C10orf76Q5T2E6 689 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 FOXR2Q6PJQ5 311 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 SCD5Q86SK9 330 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 PIGZQ86VD9 579 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 MIB1Q86YT6 1006 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 VPS45Q9NRW7 570 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 DNAJC17Q9NVM6 304 aaKnown RBP18.38■□□□□ 0.53
DDX41-217ENST00000515562 MAN1B1Q9UKM7 699 aa18.38■□□□□ 0.53
DDX41-217ENST00000515562 ANTXRLA6NF34 631 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 DCLK1O15075 740 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 MDM4O15151 490 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 TYRP14679 529 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 LIMK1P53667 647 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 COG7P83436 770 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 GOLGA7BQ2TAP0 167 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 RAB41Q5JT25 222 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 GRAMD4Q6IC98 578 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 TMEM92Q6UXU6 159 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 Q6ZNB5 142 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 ZNF513Q8N8E2 541 aaPredicted RBP18.37■□□□□ 0.53
DDX41-217ENST00000515562 HESX1Q9UBX0 185 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 NUDT5Q9UKK9 219 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 ZNF510Q9Y2H8 683 aa18.37■□□□□ 0.53
DDX41-217ENST00000515562 BICDL2A1A5D9 508 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 XPO1O14980 1071 aaKnown RBP18.36■□□□□ 0.53
DDX41-217ENST00000515562 PMM2O15305 246 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 GDF9O60383 454 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 STC2O76061 302 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 FMO5P49326 533 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 CETN1Q12798 172 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 SF3A2Q15428 464 aaKnown RBP18.36■□□□□ 0.53
DDX41-217ENST00000515562 CCDC6Q16204 474 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 CCDC40Q4G0X9 1142 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 SGO2Q562F6 1265 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 EMC10Q5UCC4 262 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 PMS2CLQ68D20 193 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 TPGS1Q6ZTW0 290 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 RSRC2Q7L4I2 434 aaKnown RBP18.36■□□□□ 0.53
DDX41-217ENST00000515562 TTC30AQ86WT1 665 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 OLIG1Q8TAK6 271 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 DDX1Q92499 740 aaKnown RBP18.36■□□□□ 0.53
DDX41-217ENST00000515562 SPACA7Q96KW9 195 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 BCCIPQ9P287 314 aaKnown RBP eCLIP18.36■□□□□ 0.53
DDX41-217ENST00000515562 RASAL2Q9UJF2 1139 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 TSPAN16Q9UKR8 245 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 STRIP2Q9ULQ0 834 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 STARD13Q9Y3M8 1113 aa18.36■□□□□ 0.53
DDX41-217ENST00000515562 DCDC2BA2VCK2 349 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 ADAM23O75077 832 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 ZBED1O96006 694 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 HNRNPLP14866 589 aaKnown RBP eCLIP18.35■□□□□ 0.53
DDX41-217ENST00000515562 CD19P15391 556 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 CD44P16070 742 aaKnown RBP18.35■□□□□ 0.53
DDX41-217ENST00000515562 TKTL1P51854 596 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 YWHAGP61981 247 aaKnown RBP eCLIP18.35■□□□□ 0.53
DDX41-217ENST00000515562 CREB5Q02930 508 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 BST2Q10589 180 aaKnown RBP18.35■□□□□ 0.53
DDX41-217ENST00000515562 ISM2Q6H9L7 571 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 KLHL10Q6JEL2 608 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 TTI2Q6NXR4 508 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 NT5C1BQ96P26 610 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 DCLK3Q9C098 648 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 KIAA1257Q9ULG3 409 aa18.35■□□□□ 0.53
DDX41-217ENST00000515562 PLXND1Q9Y4D7 1925 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 TCRBV21S2A2A0A5A6 115 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 BCLAF3A2AJT9 711 aaKnown RBP18.34■□□□□ 0.53
DDX41-217ENST00000515562 P4HA2O15460 535 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 SETSIPP0DME0 302 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 VDRP11473 427 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 CHKAP35790 457 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 DGKGP49619 791 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 PDE4CQ08493 712 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 EFEMP1Q12805 493 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 BYSLQ13895 437 aaKnown RBP18.34■□□□□ 0.53
DDX41-217ENST00000515562 IL31Q6EBC2 164 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 PM20D1Q6GTS8 502 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 UBR7Q8N806 425 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 HMGB4Q8WW32 186 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 NELFBQ8WX92 580 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 IPO9Q96P70 1041 aaKnown RBP18.34■□□□□ 0.53
DDX41-217ENST00000515562 LRRC4Q9HBW1 653 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 ZDHHC4Q9NPG8 344 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 OLA1Q9NTK5 396 aaKnown RBP18.34■□□□□ 0.53
DDX41-217ENST00000515562 MARCH2Q9P0N8 246 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 INVSQ9Y283 1065 aa18.34■□□□□ 0.53
DDX41-217ENST00000515562 SDK1Q7Z5N4 2213 aa18.33■□□□□ 0.53
DDX41-217ENST00000515562 O00370 1275 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 PAEPP09466 180 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 HOXB2P14652 356 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 NTSR1P30989 418 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 CORO1AP31146 461 aaKnown RBP18.33■□□□□ 0.52
DDX41-217ENST00000515562 P2RY2P41231 377 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 LRMPQ12912 555 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 MORC3Q14149 939 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 SIX6OS1Q8N1H7 587 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 ULBP1Q9BZM6 244 aa18.33■□□□□ 0.52
DDX41-217ENST00000515562 CIZ1Q9ULV3 898 aaPredicted RBP18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms