RNA–Protein interactions for RNA: ENST00000515223.1

TRIM41-207, Transcript of tripartite motif containing 41, humanhuman

TSL 2

Gene TRIM41, Length 5,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-207ENST00000515223 CES5AQ6NT32 575 aa16.51■□□□□ 0.23
TRIM41-207ENST00000515223 VMP1Q96GC9 406 aa16.51■□□□□ 0.23
TRIM41-207ENST00000515223 TMEM176AQ96HP8 235 aa16.51■□□□□ 0.23
TRIM41-207ENST00000515223 THUMPD3Q9BV44 507 aaKnown RBP16.51■□□□□ 0.23
TRIM41-207ENST00000515223 GLIS2Q9BZE0 524 aaPredicted RBP16.51■□□□□ 0.23
TRIM41-207ENST00000515223 AXLP30530 894 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 CYTH1Q15438 398 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 KBTBD12Q3ZCT8 623 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 FIGNQ5HY92 759 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 SDR42E2A6NKP2 422 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 FNTAP49354 379 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 TUFMP49411 452 aaKnown RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 CTCFP49711 727 aaPredicted RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 USP50Q70EL3 339 aaPredicted RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 ZNF571Q7Z3V5 609 aaPredicted RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 MGAT4DA6NG13 374 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 NFIBO00712 420 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 KCNA3P22001 575 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 IRX1P78414 480 aaPredicted RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 KLC1Q07866 573 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 PRKAA1Q13131 559 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 TUBGCP3Q96CW5 907 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 TMEM245Q9H330 911 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 ZC4H2Q9NQZ6 224 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 AP4E1Q9UPM8 1137 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 NCAM2O15394 837 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 MED24O75448 989 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 FGFR2P21802 821 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 PTPN3P26045 913 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 CHI3L1P36222 383 aaPredicted RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 CASP7P55210 303 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 DNAJC9Q8WXX5 260 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 C1QTNF7Q9BXJ2 289 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 ILKAPQ9H0C8 392 aaPredicted RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 AGO4Q9HCK5 861 aaKnown RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 TUBGCP4Q9UGJ1 667 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 CNTNAP2Q9UHC6 1331 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 CABYRO75952 493 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 OAZ1P54368 228 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 MAPK7Q13164 816 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 IKBKEQ14164 716 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 LRRC6Q86X45 466 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 FAM131BQ86XD5 332 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 PLD3Q8IV08 490 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 ZNF557Q8N988 423 aaPredicted RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 ZNF333Q96JL9 665 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 DUSP9Q99956 384 aaKnown RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 NLNQ9BYT8 704 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 CARD9Q9H257 536 aa16.5■□□□□ 0.23
TRIM41-207ENST00000515223 EXOSC4Q9NPD3 245 aaKnown RBP16.5■□□□□ 0.23
TRIM41-207ENST00000515223 ATP6V1G2O95670 118 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 ADORA2AP29274 412 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 PTPN11Q06124 597 aaPredicted RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 STX5Q13190 355 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 TRIM49D1C9J1S8 452 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 BMP10O95393 424 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 LSM8O95777 96 aaKnown RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 UBTFL6P0CB48 400 aaPredicted RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 S100A5P33763 92 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 SCNN1BP51168 640 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 TLR10Q9BXR5 811 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 CCDC134Q9H6E4 229 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 SNTNA6NMZ2 147 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 CSTF3Q12996 717 aaKnown RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 FAXCQ5TGI0 409 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 SLC27A1Q6PCB7 646 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 SLC13A5Q86YT5 568 aaPredicted RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 ATG4AQ8WYN0 398 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 ACSF2Q96CM8 615 aaPredicted RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 IGFLR1Q9H665 355 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 IL1RL2Q9HB29 575 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 NT5MQ9NPB1 228 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 SNTG2Q9NY99 539 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 DDTLA6NHG4 134 aaPredicted RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 RTN3O95197 1032 aaPredicted RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 SERPINF2P08697 491 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 TNNI3P19429 210 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 MSH3P20585 1137 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 CPA2P48052 419 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 CASP4P49662 377 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 ALDH6A1Q02252 535 aaKnown RBP16.49■□□□□ 0.23
TRIM41-207ENST00000515223 PPATQ06203 517 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 ITGA9Q13797 1035 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 Q4G0T1 1027 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 SLC30A9Q6PML9 568 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 IMPAD1Q9NX62 359 aa16.49■□□□□ 0.23
TRIM41-207ENST00000515223 CYTH3O43739 400 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 GLP2RO95838 553 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 SOX11P35716 441 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 FSCN1Q16658 493 aaKnown RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 LVRNQ6Q4G3 990 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 RTFDC1Q9BY42 306 aaPredicted RBP16.48■□□□□ 0.23
TRIM41-207ENST00000515223 TBC1D13Q9NVG8 400 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 GLRA3O75311 464 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 TOMM70O94826 608 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 JCHAINP01591 159 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 TBX4P57082 545 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 ERVK-9P63128 1117 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 ITIH4Q14624 930 aa16.48■□□□□ 0.23
TRIM41-207ENST00000515223 RD3Q7Z3Z2 195 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms