RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 RBM12Q9NTZ6 932 aaKnown RBP10.19□□□□□ -0.78
RNF4-221ENST00000513643 C2orf42Q9NWW7 574 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 STOML2Q9UJZ1 356 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 FBXO10Q9UK96 956 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 NUDT5Q9UKK9 219 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 SIK3Q9Y2K2 1263 aa10.19□□□□□ -0.78
RNF4-221ENST00000513643 MYH10P35580 1976 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 MIA3Q5JRA6 1907 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 K7EQS6 105 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 K7ESF4 209 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 M0QYV0 167 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 MDM4O15151 490 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 LILRB5O75023 590 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 FBXO21O94952 628 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 EGFP01133 1207 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 RALAP11233 206 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 UCHL3P15374 230 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 RFX1P22670 979 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 GNA15P30679 374 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 COG7P83436 770 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 GRSF1Q12849 480 aaKnown RBP eCLIP10.18□□□□□ -0.78
RNF4-221ENST00000513643 NR1H3Q13133 447 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 FBXO43Q4G163 708 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 C10orf120Q5SQS8 335 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 LY6G5CQ5SRR4 150 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 MSANTD2Q6P1R3 559 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 Q6ZS52 159 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 TADA2BQ86TJ2 420 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 C12orf40Q86WS4 652 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 TMEM25Q86YD3 366 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 CREBRFQ8IUR6 639 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 CD101Q93033 1021 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 STK33Q9BYT3 514 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 ABCC13Q9NSE7 274 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 SPATA6Q9NWH7 488 aaPredicted RBP10.18□□□□□ -0.78
RNF4-221ENST00000513643 TAB2Q9NYJ8 693 aa10.18□□□□□ -0.78
RNF4-221ENST00000513643 EPHB6O15197 1021 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 PAPSS1O43252 624 aaPredicted RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 LAMTOR5O43504 91 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 MED7O43513 233 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 LETM1O95202 739 aaPredicted RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 PENKP01210 267 aaPredicted RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 IGLV3-27P01718 113 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 CISD3P0C7P0 127 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 KRT5P13647 590 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 CDH5P33151 784 aaPredicted RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 ACADSBP45954 432 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 SLC6A11P48066 632 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 RGS7P49802 495 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 CCR3P51677 355 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 COPB1P53618 953 aaKnown RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 JAM2P57087 298 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 DRAP1Q14919 205 aaPredicted RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 IQCB1Q15051 598 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 ARHGAP44Q17R89 818 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 RNF43Q68DV7 783 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 PKN3Q6P5Z2 889 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 SLC47A2Q86VL8 602 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 DHX40Q8IX18 779 aaKnown RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 CLEC4CQ8WTT0 213 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 ATOH1Q92858 354 aaPredicted RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 ERGIC2Q96RQ1 377 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 FAM126AQ9BYI3 521 aaPredicted RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 SPHK2Q9NRA0 654 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 OLA1Q9NTK5 396 aaKnown RBP10.17□□□□□ -0.78
RNF4-221ENST00000513643 MARCH2Q9P0N8 246 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 HCN2Q9UL51 889 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 SH3BP1Q9Y3L3 701 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 DAAM1Q9Y4D1 1078 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 FHOD1Q9Y613 1164 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 FANCMQ8IYD8 2048 aa10.17□□□□□ -0.78
RNF4-221ENST00000513643 MYOFQ9NZM1 2061 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 ANTXRLA6NF34 631 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 LGALS16A8MUM7 142 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 F8VZ95 297 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 SCAMP3O14828 347 aaKnown RBP10.16□□□□□ -0.78
RNF4-221ENST00000513643 CACNG3O60359 315 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 ADH1CP00326 375 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 IGLV3-25P01717 112 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 PNMA6AP0CW24 399 aaPredicted RBP10.16□□□□□ -0.78
RNF4-221ENST00000513643 ADH5P11766 374 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 LCP1P13796 627 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 KIR2DL1P43626 348 aaPredicted RBP10.16□□□□□ -0.78
RNF4-221ENST00000513643 CXCL12P48061 93 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 KLK7P49862 253 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 BPIFB4P59827 614 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 SATB1Q01826 763 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 GAD2Q05329 585 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 PTK2Q05397 1052 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 EFEMP1Q12805 493 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 PDCLQ13371 301 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 ANO6Q4KMQ2 910 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 BTBD8Q5XKL5 378 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 CAVIN1Q6NZI2 390 aaKnown RBP10.16□□□□□ -0.78
RNF4-221ENST00000513643 SCUBE3Q8IX30 993 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 SIX6OS1Q8N1H7 587 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 CPXM2Q8N436 756 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 AZIN2Q96A70 460 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 SLC39A13Q96H72 371 aa10.16□□□□□ -0.78
RNF4-221ENST00000513643 CPXM1Q96SM3 734 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms