RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 BIRC3Q13489 604 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 BMPR2Q13873 1038 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 DHX8Q14562 1220 aaKnown RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 RAB30Q15771 203 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 MAPKAPK3Q16644 382 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 PTCHD3Q3KNS1 767 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 ZACNQ401N2 412 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 FAM83BQ5T0W9 1011 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 ATPAF1Q5TC12 328 aaPredicted RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 ANKRD45Q5TZF3 282 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 CLEC9AQ6UXN8 241 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 RFX8Q6ZV50 586 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 ABRAQ8N0Z2 381 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 MYCT1Q8N699 235 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 IPO4Q8TEX9 1081 aaKnown RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 ATG4AQ8WYN0 398 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 LPIN2Q92539 896 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 GLG1Q92896 1179 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 R3HDM4Q96D70 268 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 ADAM2Q99965 735 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 C17orf80Q9BSJ5 609 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 KRTAP4-11Q9BYQ6 195 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 MMRN2Q9H8L6 949 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 PTPRHQ9HD43 1115 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 NECTIN3Q9NQS3 549 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 KLC4Q9NSK0 619 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 DACT1Q9NYF0 836 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 DNMT3BQ9UBC3 853 aaKnown RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 DKK4Q9UBT3 224 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 NKX1-2Q9UD57 310 aaPredicted RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.87□□□□□ -1.63
HTT-210ENST00000512909 STEAP1Q9UHE8 339 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 MORC2Q9Y6X9 1032 aaPredicted RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 CHD2O14647 1828 aaKnown RBP4.87□□□□□ -1.63
HTT-210ENST00000512909 GPRASP1Q5JY77 1395 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 MST1RQ04912 1400 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 DIP2AQ14689 1571 aa4.87□□□□□ -1.63
HTT-210ENST00000512909 ROBO1Q9Y6N7 1651 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 A1L4Q6 167 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 MARCH11A6NNE9 402 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 CES2O00748 559 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 NBNO60934 754 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 ZFPL1O95159 310 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 NR2F6P10588 404 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 INSRRP14616 1297 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 ZFXP17010 805 aaPredicted RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 FOLR3P41439 243 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 GSTM5P46439 218 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 RBM6P78332 1123 aaKnown RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 CDSNQ15517 529 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 NPY5RQ15761 445 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 PFKFB4Q16877 469 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 TBC1D25Q3MII6 688 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 ZIK1Q3SY52 487 aaPredicted RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 MIIPQ5JXC2 388 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 TREML2Q5T2D2 321 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 VWA1Q6PCB0 445 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 KLHL17Q6TDP4 642 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 DTX2Q86UW9 622 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 CAND1Q86VP6 1230 aaKnown RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 CCDC28AQ8IWP9 274 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 GLIS1Q8NBF1 620 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 CYP2W1Q8TAV3 490 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 MYCBPAPQ8TBZ2 947 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 ACTRT2Q8TDY3 377 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 WDR60Q8WVS4 1066 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 ASB10Q8WXI3 467 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 TFAP2BQ92481 460 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 ZNF503Q96F45 646 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 RMDN3Q96TC7 470 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 CHMP4AQ9BY43 222 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 TRIM5Q9C035 493 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 BRD8Q9H0E9 1235 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 MYLK2Q9H1R3 596 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 OBP2BQ9NPH6 170 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 HELLSQ9NRZ9 838 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 VSX1Q9NZR4 365 aaPredicted RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 TRPC5Q9UL62 973 aaPredicted RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 TONSLQ96HA7 1378 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 MED1Q15648 1581 aaPredicted RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 SETBP1Q9Y6X0 1596 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 PHLPP1O60346 1717 aa4.86□□□□□ -1.63
HTT-210ENST00000512909 SIPA1L2Q9P2F8 1722 aaPredicted RBP4.86□□□□□ -1.63
HTT-210ENST00000512909 LOC102724159A0A0B4J2E5 919 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 NPIPB8E9PQR5 432 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 URI1O94763 535 aaPredicted RBP4.85□□□□□ -1.63
HTT-210ENST00000512909 GLP2RO95838 553 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 FESP07332 822 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 EGR1P18146 543 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 NR4A1P22736 598 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 RBL1P28749 1068 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 UQCRC1P31930 480 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 HALP42357 657 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 GRK6P43250 576 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 CLCN2P51788 898 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 FSTL1Q12841 308 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 PRKG1Q13976 671 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 PTPRRQ15256 657 aa4.85□□□□□ -1.63
HTT-210ENST00000512909 PWP2Q15269 919 aaKnown RBP4.85□□□□□ -1.63
HTT-210ENST00000512909 ST3GAL2Q16842 350 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms