RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 NR3C1P04150 777 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 PRR29P0C7W0 189 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 GABRG2P18507 467 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 RPL13P26373 211 aaKnown RBP13.25□□□□□ -0.29
VEGFA-216ENST00000512683 CHKAP35790 457 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 SYKP43405 635 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 MAP3K7CLP57077 242 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 RPL6Q02878 288 aaKnown RBP13.25□□□□□ -0.29
VEGFA-216ENST00000512683 ZNF33AQ06730 810 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 UAP1L1Q3KQV9 507 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 INTS8Q75QN2 995 aaKnown RBP13.25□□□□□ -0.29
VEGFA-216ENST00000512683 SFTPA1Q8IWL2 248 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 CHPFQ8IZ52 775 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 CCDC150Q8NCX0 1101 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 IPO4Q8TEX9 1081 aaKnown RBP13.25□□□□□ -0.29
VEGFA-216ENST00000512683 CYFIP2Q96F07 1278 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 BBS2Q9BXC9 721 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 ADAM33Q9BZ11 813 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 ZDHHC5Q9C0B5 715 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 SCAND2PQ9GZW5 306 aaPredicted RBP13.25□□□□□ -0.29
VEGFA-216ENST00000512683 SDCBP2Q9H190 292 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 GOLPH3LQ9H4A5 285 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 CAPN10Q9HC96 672 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 CD248Q9HCU0 757 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 SLC27A6Q9Y2P4 619 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 NEUROG3Q9Y4Z2 214 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 SPAG17Q6Q759 2223 aa13.25□□□□□ -0.29
VEGFA-216ENST00000512683 ATG2BQ96BY7 2078 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 A0A1W2PQ27 194 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 A0A1W2PQ64 194 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 ANTXRLA6NF34 631 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 ARHGAP33O14559 1287 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 OPHN1O60890 802 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 BEST1O76090 585 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 CLSTN1O94985 981 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 CISD3P0C7P0 127 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 RALAP11233 206 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 TYRP14679 529 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 GNSP15586 552 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 ITPKAP23677 461 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 GTF2H1P32780 548 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 ASPAP45381 313 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 VAMP7P51809 220 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 KIF11P52732 1056 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 DPYDQ12882 1025 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 FOXC1Q12948 553 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 WDR45BQ5MNZ6 344 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 CCDC186Q7Z3E2 898 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 ARHGAP18Q8N392 663 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 DUSP16Q9BY84 665 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 GDPD2Q9HCC8 539 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 DNAAF2Q9NVR5 837 aaKnown RBP13.24□□□□□ -0.29
VEGFA-216ENST00000512683 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.24□□□□□ -0.29
VEGFA-216ENST00000512683 CALCOCO1Q9P1Z2 691 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 HCN2Q9UL51 889 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 MSRB2Q9Y3D2 182 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 USP3Q9Y6I4 520 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 MYO16Q9Y6X6 1858 aa13.24□□□□□ -0.29
VEGFA-216ENST00000512683 IGHV1OR15-9A0A0B4J2B8 117 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 HHLA1C9JL84 531 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 NEDD8-MDP1E9PL57 170 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 SCAMP3O14828 347 aaKnown RBP13.23□□□□□ -0.29
VEGFA-216ENST00000512683 RHOBTB3O94955 611 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 TBX18O95935 607 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 HLA-DRAP01903 254 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 CFIP05156 583 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 RARGP13631 454 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 CCDC130P13994 396 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 ACO1P21399 889 aaKnown RBP13.23□□□□□ -0.29
VEGFA-216ENST00000512683 OXTRP30559 389 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 DGKGP49619 791 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 DLG4P78352 724 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 ZNF423Q2M1K9 1284 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 Q6ZNB5 142 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 KRBA2Q6ZNG9 492 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 CLEC20AQ6ZU45 233 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 FRMD1Q8N878 549 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 C12orf29Q8N999 325 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 DEFB124Q8NES8 71 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 CADM4Q8NFZ8 388 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 UCMAQ8WVF2 138 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 ELMO3Q96BJ8 720 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 SCNM1Q9BWG6 230 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 TMEM121BQ9BXQ6 578 aaPredicted RBP13.23□□□□□ -0.29
VEGFA-216ENST00000512683 SLC2A11Q9BYW1 496 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 ZMIZ1Q9ULJ6 1067 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 ATP6V1DQ9Y5K8 247 aa13.23□□□□□ -0.29
VEGFA-216ENST00000512683 RALGAPA1Q6GYQ0 2036 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 ZFHX4Q86UP3 3567 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 NDUFS2O75306 463 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 CILPO75339 1184 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 ZNF202O95125 648 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 PENKP01210 267 aaPredicted RBP13.22□□□□□ -0.29
VEGFA-216ENST00000512683 IRF1P10914 325 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 KRT13P13646 458 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 PSMC2P35998 433 aaKnown RBP13.22□□□□□ -0.29
VEGFA-216ENST00000512683 MAPK8P45983 427 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 STARD3Q14849 445 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 C10orf120Q5SQS8 335 aa13.22□□□□□ -0.29
VEGFA-216ENST00000512683 C1orf220Q5T0J3 134 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms