RNA–Protein interactions for RNA: ENST00000512336.5

DDR1-267, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 572 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-267ENST00000512336 SCAMP5Q8TAC9 235 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 B3GNT5Q9BYG0 378 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 MKRN2Q9H000 416 aaKnown RBP12.93□□□□□ -0.34
DDR1-267ENST00000512336 MRPL44Q9H9J2 332 aaKnown RBP12.93□□□□□ -0.34
DDR1-267ENST00000512336 ITM2CQ9NQX7 267 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 GMIPQ9P107 970 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 EIF2B4Q9UI10 523 aaKnown RBP12.93□□□□□ -0.34
DDR1-267ENST00000512336 STON1Q9Y6Q2 735 aa12.93□□□□□ -0.34
DDR1-267ENST00000512336 GOLGA4Q13439 2230 aaKnown RBP12.93□□□□□ -0.34
DDR1-267ENST00000512336 SHROOM3Q8TF72 1996 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 E9PAM4 449 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 GREM1O60565 184 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 GCNT3O95395 438 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 TNNC2P02585 160 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 HLA-EP13747 358 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 DGKGP49619 791 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 CSNK1EP49674 416 aaKnown RBP12.92□□□□□ -0.34
DDR1-267ENST00000512336 TPMTP51580 245 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 CASP5P51878 434 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 SUZ12Q15022 739 aaKnown RBP12.92□□□□□ -0.34
DDR1-267ENST00000512336 SNX30Q5VWJ9 437 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 SYCP3Q8IZU3 236 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 C1orf216Q8TAB5 229 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 BHMTQ93088 406 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 TMX3Q96JJ7 454 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 KCNK16Q96T55 309 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 NACA2Q9H009 215 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 MARK1Q9P0L2 795 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 HECTD1Q9ULT8 2610 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 SLCO1B1Q9Y6L6 691 aa12.92□□□□□ -0.34
DDR1-267ENST00000512336 TLX3O43711 291 aaPredicted RBP12.91□□□□□ -0.34
DDR1-267ENST00000512336 TACC1O75410 805 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 CISD3P0C7P0 127 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 ZDHHC11BP0C7U3 371 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 EIF2S3P41091 472 aaKnown RBP12.91□□□□□ -0.34
DDR1-267ENST00000512336 GRK6P43250 576 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 PGFP49763 221 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 TUBP50607 506 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 SLC5A3P53794 718 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 DUOXA2Q1HG44 320 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 KIF19Q2TAC6 998 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
DDR1-267ENST00000512336 LRRC69Q6ZNQ3 347 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 HTR3DQ70Z44 454 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 CACUL1Q86Y37 369 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 TMPRSS6Q8IU80 811 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 GPD1LQ8N335 351 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 B3GALNT2Q8NCR0 500 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 SNX19Q92543 992 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 SIPA1Q96FS4 1042 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 FCRL3Q96P31 734 aaPredicted RBP12.91□□□□□ -0.34
DDR1-267ENST00000512336 WDR35Q9P2L0 1181 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 SEL1LQ9UBV2 794 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.91□□□□□ -0.34
DDR1-267ENST00000512336 SNX11Q9Y5W9 270 aa12.91□□□□□ -0.34
DDR1-267ENST00000512336 MUC22E2RYF6 1773 aaPredicted RBP12.91□□□□□ -0.34
DDR1-267ENST00000512336 MYO18BQ8IUG5 2567 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 KCNK3O14649 394 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 TLR5O60602 858 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 PRPF6O94906 941 aaKnown RBP12.9□□□□□ -0.34
DDR1-267ENST00000512336 TBX18O95935 607 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 OXTRP30559 389 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 LONP1P36776 959 aaKnown RBP12.9□□□□□ -0.34
DDR1-267ENST00000512336 IL12RB1P42701 662 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 AFF3P51826 1226 aaKnown RBP12.9□□□□□ -0.34
DDR1-267ENST00000512336 CLDN6P56747 220 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 SEMG2Q02383 582 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 CBWD2Q8IUF1 395 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 LSM14AQ8ND56 463 aaKnown RBP12.9□□□□□ -0.34
DDR1-267ENST00000512336 PRCCQ92733 491 aaPredicted RBP12.9□□□□□ -0.34
DDR1-267ENST00000512336 NXPE2Q96DL1 559 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 P2RY11Q96G91 374 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 NUP58Q9BVL2 599 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 FGFBP2Q9BYJ0 223 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 PLK2Q9NYY3 685 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 IL37Q9NZH6 218 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 PCDHB13Q9Y5F0 798 aa12.9□□□□□ -0.34
DDR1-267ENST00000512336 A8MXQ7 604 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 J3QKU1 62 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 CST3P01034 146 aaPredicted RBP12.89□□□□□ -0.35
DDR1-267ENST00000512336 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 GAP43P17677 238 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 CCT8P50990 548 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 TNNC1P63316 161 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 SF3A1Q15459 793 aaKnown RBP12.89□□□□□ -0.35
DDR1-267ENST00000512336 LAYNQ6UX15 382 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 TRAPPC11Q7Z392 1133 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 FAM35AQ86V20 835 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 FAM124AQ86V42 546 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 TMPRSS12Q86WS5 348 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 DNAJC19Q96DA6 116 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 MED10Q9BTT4 135 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 KLF16Q9BXK1 252 aaPredicted RBP12.89□□□□□ -0.35
DDR1-267ENST00000512336 C6orf106Q9H6K1 298 aaPredicted RBP12.89□□□□□ -0.35
DDR1-267ENST00000512336 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.89□□□□□ -0.35
DDR1-267ENST00000512336 THAP10Q9P2Z0 257 aaPredicted RBP12.89□□□□□ -0.35
DDR1-267ENST00000512336 LSM7Q9UK45 103 aaKnown RBP12.89□□□□□ -0.35
DDR1-267ENST00000512336 ANKRD6Q9Y2G4 727 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 PTPRQQ9UMZ3 2332 aa12.89□□□□□ -0.35
DDR1-267ENST00000512336 FAM92AA1XBS5 289 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms