RNA–Protein interactions for RNA: ENST00000512332.5

CPNE4-210, Transcript of copine 4, humanhuman

TSL 1 (best) BASIC

Gene CPNE4, Length 2,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-210ENST00000512332 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.59□□□□□ -0.87
CPNE4-210ENST00000512332 NME7Q9Y5B8 376 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 HEY1Q9Y5J3 304 aa9.59□□□□□ -0.87
CPNE4-210ENST00000512332 GOLGA8RI6L899 631 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PIK3R2O00459 728 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 AVILO75366 819 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PIAS1O75925 651 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 ANP32DO95626 131 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 APOEP02649 317 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PYGBP11216 843 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 CYP2F1P24903 491 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PTPN4P29074 926 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 CCNFP41002 786 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 ADCYAP1R1P41586 468 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 ACADSBP45954 432 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 BCAT1P54687 386 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 CDK16Q00536 496 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 CDK18Q07002 472 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 BST2Q10589 180 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 CA9Q16790 459 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SOWAHAQ2M3V2 549 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 FAM91A1Q658Y4 838 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 BZW1Q7L1Q6 419 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 LIMS2Q7Z4I7 341 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 VPS52Q8N1B4 723 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 CFAP61Q8NHU2 1237 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PTPRN2Q92932 1015 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SIGLEC10Q96LC7 697 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PLAC1Q9HBJ0 212 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 XAB2Q9HCS7 855 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 NPHS2Q9NP85 383 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 GDAP2Q9NXN4 497 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 KANSL3Q9P2N6 904 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 HAO1Q9UJM8 370 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 UBQLN1Q9UMX0 589 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 C15orf41Q9Y2V0 281 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 RALGAPA2Q2PPJ7 1873 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 A6NJR5 290 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 HACD1B0YJ81 288 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 E7ENQ6 273 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PIRO00625 290 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 COPEO14579 308 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 GPR32O75388 356 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 KRT38O76015 456 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 NPTXRO95502 500 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 CD4P01730 458 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 APRTP07741 180 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 MMP3P08254 477 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 DLDP09622 509 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 MLNP12872 115 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 TARSP26639 723 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 AXLP30530 894 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 GJA5P36382 358 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SERPINB4P48594 390 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 MTM1Q13496 603 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SEMA5AQ13591 1074 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 DGKDQ16760 1214 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 TAF1BQ53T94 588 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 WASHC2DQ5SRD0 308 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 C9orf57Q5W0N0 161 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 IQSEC1Q6DN90 963 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 NOTUMQ6P988 496 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 TIFABQ6ZNK6 161 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 STRADAQ7RTN6 431 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PRPF39Q86UA1 669 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 MTDHQ86UE4 582 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 HACE1Q8IYU2 909 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 GIMAP7Q8NHV1 300 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 RAB3IL1Q8TBN0 382 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 STAMBPL1Q96FJ0 436 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 THOC1Q96FV9 657 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 QKIQ96PU8 341 aaKnown RBP eCLIP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 FAM111AQ96PZ2 611 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SRPK1Q96SB4 655 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 KLF6Q99612 283 aaPredicted RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 EBNA1BP2Q99848 306 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 TBC1D10AQ9BXI6 508 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 GPATCH2LQ9NWQ4 482 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 GEMIN8Q9NWZ8 242 aaKnown RBP9.58□□□□□ -0.88
CPNE4-210ENST00000512332 MTMR10Q9NXD2 777 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SLC5A4Q9NY91 659 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SNTG2Q9NY99 539 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 MORF4L1Q9UBU8 362 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 PLLPQ9Y342 182 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 L3MBTL1Q9Y468 752 aa9.58□□□□□ -0.88
CPNE4-210ENST00000512332 SCN1AP35498 2009 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 WDR91A4D1P6 747 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 FAM159BA6NKW6 160 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 A8MXQ7 604 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 TRIM49D1C9J1S8 452 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 HGSO14964 777 aaPredicted RBP9.57□□□□□ -0.88
CPNE4-210ENST00000512332 SMPD1P17405 629 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 CNTFP26441 200 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 PNPLA4P41247 253 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 GCLCP48506 637 aaPredicted RBP9.57□□□□□ -0.88
CPNE4-210ENST00000512332 SERPINB9P50453 376 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 ARFIP2P53365 341 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 SARNPP82979 210 aaKnown RBP9.57□□□□□ -0.88
CPNE4-210ENST00000512332 KRT72Q14CN4 511 aa9.57□□□□□ -0.88
CPNE4-210ENST00000512332 DBN1Q16643 649 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms