RNA–Protein interactions for RNA: ENST00000512229.6

PCDHA4-202, Transcript of protocadherin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHA4, Length 4,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-202ENST00000512229 GFAPP14136 432 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 ELK3P41970 407 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 AARSP49588 968 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 TAS2R40P59535 323 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 ARMC2Q8NEN0 867 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 LPPQ93052 612 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 FAM111AQ96PZ2 611 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 EFHD1Q9BUP0 239 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 DERAQ9Y315 318 aa13.54□□□□□ -0.24
PCDHA4-202ENST00000512229 CFAP73A6NFT4 308 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 TOMM70O94826 608 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 PTPN20Q4JDL3 420 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 TRPM8Q7Z2W7 1104 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 SRLQ86TD4 932 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 LRRC34Q8IZ02 419 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 BHMTQ93088 406 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 E2F7Q96AV8 911 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 ULK4Q96C45 1275 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 CELF6Q96J87 481 aaKnown RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 DDX23Q9BUQ8 820 aaKnown RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 FZD8Q9H461 694 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 PDZD7Q9H5P4 517 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 ECT2Q9H8V3 914 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 DRG1Q9Y295 367 aaKnown RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 CKMP06732 381 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 RBL1P28749 1068 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 SSTR1P30872 391 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 RPL9P32969 192 aaKnown RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 ENPEPQ07075 957 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 PPP1R26Q5T8A7 1209 aaPredicted RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 C18orf25Q96B23 403 aaPredicted RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 EGFL8Q99944 293 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 LBHD1Q9BQE6 289 aaPredicted RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 MANSC1Q9H8J5 431 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 RBM22Q9NW64 420 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 LRG1P02750 347 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 MBTD1Q05BQ5 628 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 PLEKHA7Q6IQ23 1121 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 BBS12Q6ZW61 710 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 MRPS31Q92665 395 aaKnown RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 ELMO2Q96JJ3 720 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 YME1L1Q96TA2 773 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 CEP41Q9BYV8 373 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 TLR8Q9NR97 1041 aaKnown RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 IPPQ9Y573 584 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 OPHN1O60890 802 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 ARIH2O95376 493 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 YBX3P16989 372 aaKnown RBP eCLIP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 KCNA3P22001 575 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 TNFRSF8P28908 595 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 HIPK4Q8NE63 616 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 MRPL9Q9BYD2 267 aaKnown RBP13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 C10orf88Q9H8K7 445 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 CDH9Q9ULB4 789 aa13.53□□□□□ -0.24
PCDHA4-202ENST00000512229 E2F8A0AVK6 867 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 PMM2O15305 246 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 TSPAN1O60635 241 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 NOL3O60936 208 aaKnown RBP13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 YWHAQP27348 245 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 PDAP1Q13442 181 aaKnown RBP13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 SLC39A12Q504Y0 691 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 DUPD1Q68J44 220 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 ERP27Q96DN0 273 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 SNRNP25Q9BV90 132 aaKnown RBP13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 Q9H521 79 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 NINJ2Q9NZG7 142 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 GIT1Q9Y2X7 761 aa13.52□□□□□ -0.24
PCDHA4-202ENST00000512229 H0Y3Z8 333 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 H0Y626 953 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 C22orf31O95567 290 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 CDH18Q13634 790 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 DPYSL3Q14195 570 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 RABGAP1LQ5R372 815 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 C9orf57Q5W0N0 161 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 SERPINB11Q96P15 392 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 RNF157Q96PX1 679 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 CYP4F11Q9HBI6 524 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 NMRK2Q9NPI5 230 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 UBP1Q9NZI7 540 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 COL16A1Q07092 1604 aaPredicted RBP13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 MYH14Q7Z406 1995 aaKnown RBP13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 LIASO43766 372 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 RAG1P15918 1043 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 TBX4P57082 545 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 ASTE1Q2TB18 679 aaPredicted RBP13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 LCLAT1Q6UWP7 414 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 ZCCHC9Q8N567 271 aaKnown RBP13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 LRRC57Q8N9N7 239 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 JOSD2Q8TAC2 188 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 MTBPQ96DY7 904 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 PGM2Q96G03 612 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 TSPAN18Q96SJ8 248 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 CPXM1Q96SM3 734 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 TRIM54Q9BYV2 358 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 TKTL2Q9H0I9 626 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 CHST12Q9NRB3 414 aa13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 NOCTQ9UK39 431 aaKnown RBP13.52□□□□□ -0.25
PCDHA4-202ENST00000512229 O00370 1275 aa13.51□□□□□ -0.25
PCDHA4-202ENST00000512229 CILPO75339 1184 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms