RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 CCNG2Q16589 344 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIAA0753Q2KHM9 967 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HIBCHQ6NVY1 386 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ESRP1Q6NXG1 681 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NFRKBQ6P4R8 1299 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SHQ1Q6PI26 577 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC149Q6ZUS6 474 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HS2ST1Q7LGA3 356 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 LYSMD3Q7Z3D4 306 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CARM1Q86X55 608 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF280BQ86YH2 543 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MYLK4Q86YV6 388 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CLEC10AQ8IUN9 316 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARFGAP2Q8N6H7 521 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC44A5Q8NCS7 719 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DQX1Q8TE96 717 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CTNNBL1Q8WYA6 563 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 WASF1Q92558 559 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ZNF592Q92610 1267 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 N4BP2L2Q92802 583 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DHTKD1Q96HY7 919 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC114Q96M63 670 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GDAP1L1Q96MZ0 367 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NDEL1Q9GZM8 345 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KANSL2Q9H9L4 492 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MLXIPQ9HAP2 919 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 POLE4Q9NR33 117 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CYP26B1Q9NR63 512 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RNF19AQ9NV58 838 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 H2AFY2Q9P0M6 372 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 USP36Q9P275 1121 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TEKT2Q9UIF3 430 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SIX4Q9UIU6 781 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ADAMTS6Q9UKP5 1117 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RYR1P21817 5038 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TRIM75PA6NK02 468 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DYNC1LI2O43237 492 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PTCD1O75127 700 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SIN3BO75182 1162 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PSIP1O75475 530 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 IGSF6O95976 241 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPLP2P05387 115 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RARBP10826 455 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SCG2P13521 617 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ENPP1P22413 925 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SKIV2L2P42285 1042 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RPS9P46781 194 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GP2P55259 537 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARL4CP56559 192 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ARHGAP4P98171 946 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SNX1Q13596 522 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SPA17Q15506 151 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PSMD5Q16401 504 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 IFI16Q16666 785 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM266Q2M3C6 531 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIAA0319Q5VV43 1072 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CIAPIN1Q6FI81 312 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 LAMTOR1Q6IAA8 161 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NANOGP8Q6NSW7 305 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TMEM207Q6UWW9 146 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 BIVMQ86UB2 503 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NR2C2APQ86WQ0 139 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 RAB11FIP4Q86YS3 637 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 METTL13Q8N6R0 699 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PAPD5Q8NDF8 572 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FAM13CQ8NE31 585 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 OR4M2Q8NGB6 313 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CCDC12Q8WUD4 166 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 LZICQ8WZA0 190 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 POMGNT1Q8WZA1 660 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GLG1Q92896 1179 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 GFM2Q969S9 779 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 EID2BQ96D98 161 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 VPS50Q96JG6 964 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 C1orf74Q96LT6 269 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 NR1H4Q96RI1 486 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SRPK1Q96SB4 655 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 SLC29A1Q99808 456 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 UNKQ9C0B0 810 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 UBE2ZQ9H832 354 aaPredicted RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIF9Q9HAQ2 790 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CD320Q9NPF0 282 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 WDR35Q9P2L0 1181 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 DCDC2Q9UHG0 476 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HDAC9Q9UKV0 1011 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 MAFFQ9ULX9 164 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PAXBP1Q9Y5B6 917 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PCDHB13Q9Y5F0 798 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 H0YIN7 160 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 H3BUI4 141 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 BIRC5O15392 142 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 CRCPO75575 148 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 FLOT1O75955 427 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 BAG3O95817 575 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 TSPAN12O95859 305 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 ALDOAP04075 364 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 APOA4P06727 396 aa1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 HMGA1P17096 107 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 PSMA4P25789 261 aaKnown RBP1.73□□□□□ -2.13
TRAPPC13-211ENST00000512009 KIF5BP33176 963 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms