RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 HSPA7P48741 367 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 NT5C2P49902 561 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 GBX2P52951 348 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 JAG1P78504 1218 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CHAF1BQ13112 559 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 RRP1BQ14684 758 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 XKR3Q5GH77 459 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 HABP4Q5JVS0 413 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 AGMOQ6ZNB7 445 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 TMC6Q7Z403 805 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SPATA21Q7Z572 469 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PRPF39Q86UA1 669 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 DENND1CQ8IV53 801 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SCUBE1Q8IWY4 988 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 C17orf53Q8N3J3 647 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 IQUBQ8NA54 791 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 OR8K3Q8NH51 312 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SLC5A11Q8WWX8 675 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 WASF1Q92558 559 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 SYN2Q92777 582 aaPredicted RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 KLRG1Q96E93 195 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 GBP5Q96PP8 586 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF341Q9BYN7 854 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 COX16Q9P0S2 106 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 IL19Q9UHD0 177 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 CAMK2AQ9UQM7 478 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 PIN4Q9Y237 131 aaKnown RBP5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 STK38LQ9Y2H1 464 aa5.25□□□□□ -1.57
TRAPPC11-208ENST00000511955 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 MAGEB16A2A368 324 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 A4D1N5 150 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PPEF2O14830 753 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 LSM1O15116 133 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 NEBLO76041 1014 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 FGF18O76093 207 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 GGPS1O95749 300 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 GH2P01242 217 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ALBP02768 609 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 QDPRP09417 244 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TSHRP16473 764 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CES1P23141 567 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 AKAP5P24588 427 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 MCM3P25205 808 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ALDH4A1P30038 563 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CAMLGP49069 296 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 STAT5BP51692 787 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 STARD6P59095 220 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PPP2R2AP63151 447 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PTH1RQ03431 593 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PRKCZQ05513 592 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 COTL1Q14019 142 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRIM25Q14258 630 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SQLEQ14534 574 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 AAK1Q2M2I8 961 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 MPEG1Q2M385 716 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 IGSF11Q5DX21 431 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRIM61Q5EBN2 209 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 FAM47AQ5JRC9 791 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CEP78Q5JTW2 689 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 KCNT1Q5JUK3 1230 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ACAD10Q6JQN1 1059 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PAPD4Q6PIY7 484 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PTCHD4Q6ZW05 846 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 KIAA0319LQ8IZA0 1049 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TAGAPQ8N103 731 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 C19orf47Q8N9M1 422 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 DDX55Q8NHQ9 600 aaKnown RBP eCLIP5.24□□□□□ -1.571e-7■■■■□ 19.5
TRAPPC11-208ENST00000511955 GPT2Q8TD30 523 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CACTINQ8WUQ7 758 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 DEPDC1BQ8WUY9 529 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZNF566Q969W8 418 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 EFHD2Q96C19 240 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PKP4Q99569 1192 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CITED2Q99967 270 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 C19orf43Q9BQ61 176 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ERP44Q9BS26 406 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 LRRC3Q9BY71 257 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 FUT8Q9BYC5 575 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 IRX2Q9BZI1 471 aaPredicted RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CD244Q9BZW8 370 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 MKNK2Q9HBH9 465 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PNPLA8Q9NP80 782 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 SNX15Q9NRS6 342 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ATAD3AQ9NVI7 634 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 THG1LQ9NWX6 298 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 LCMT1Q9UIC8 334 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 RCOR1Q9UKL0 485 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CNOT6Q9ULM6 557 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ZHX2Q9Y6X8 837 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 ECM29Q5VYK3 1845 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 WDR33Q9C0J8 1336 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 BAZ2AQ9UIF9 1905 aaKnown RBP5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 AGRPO00253 132 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 HIP1O00291 1037 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 NIPSNAP2O75323 286 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 TRPA1O75762 1119 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 PRAMEF12O95522 483 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 KRT14P02533 472 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 CYP3A4P08684 503 aa5.24□□□□□ -1.57
TRAPPC11-208ENST00000511955 BCRP11274 1271 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms