RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 RABL3Q5HYI8 236 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 GPATCH4Q5T3I0 446 aaKnown RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 SLC9C2Q5TAH2 1124 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 ACAD10Q6JQN1 1059 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 CCDC144NLQ6NUI1 221 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 SYT13Q7L8C5 426 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 SYNE4Q8N205 404 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 SUPT20HQ8NEM7 779 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 ADAMTS15Q8TE58 950 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 SLC22A17Q8WUG5 538 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 CTHRC1Q96CG8 243 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 TOX2Q96NM4 488 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 NPAS1Q99742 590 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 PAIP1Q9H074 479 aaKnown RBP6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 NOX1Q9Y5S8 564 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 LMTK3Q96Q04 1460 aa6.13□□□□□ -1.43
HMGB1P47-201ENST00000511281 K7ENM7 598 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 SLC16A3O15427 465 aaKnown RBP6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 SEPT4O43236 478 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZNF623O75123 536 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 KRT38O76015 456 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 SCAF4O95104 1147 aaKnown RBP6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 HNRNPA1P09651 372 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 TGM1P22735 817 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 HIBADHP31937 336 aaKnown RBP6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 RBM5P52756 815 aaKnown RBP eCLIP6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 CASP6P55212 293 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 SP2Q02086 613 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 ITIH3Q06033 890 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 LY6KQ17RY6 165 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 GLB1LQ6UWU2 654 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 TCP11L2Q8N4U5 519 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 PTGR2Q8N8N7 351 aaPredicted RBP6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZMIZ2Q8NF64 920 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 MCRS1Q96EZ8 462 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 WDYHV1Q96HA8 205 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 ACTRT3Q9BYD9 372 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 ALOXE3Q9BYJ1 711 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 XYLT2Q9H1B5 865 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 AKIP1Q9NQ31 210 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 OLA1Q9NTK5 396 aaKnown RBP6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 GABRQQ9UN88 632 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 SLC45A1Q9Y2W3 748 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 CYP46A1Q9Y6A2 500 aa6.12□□□□□ -1.43
HMGB1P47-201ENST00000511281 TRGV11A0A075B6L2 103 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 STX16-NPEPL1H3BU86 382 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 STX16O14662 325 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 PPM1DO15297 605 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 NKX2-8O15522 239 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 HNRNPRO43390 633 aaKnown RBP6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 LPXNO60711 386 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 CDKL5O76039 1030 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 CSF1P09603 554 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 TMEM225BP0DP42 221 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 ACRV1P26436 265 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 GSTM5P46439 218 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 NXPH1P58417 271 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 RBM6P78332 1123 aaKnown RBP6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 FAM189BP81408 668 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 AAK1Q2M2I8 961 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZNF484Q5JVG2 852 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 TEDDM1Q5T9Z0 273 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 TTLL5Q6EMB2 1281 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 LIMS2Q7Z4I7 341 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 TMPRSS6Q8IU80 811 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 LRRC56Q8IYG6 542 aaPredicted RBP6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 C11orf44Q8N8P7 122 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZUFSPQ96AP4 578 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 RNF31Q96EP0 1072 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 NEUROD6Q96NK8 337 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 WWC2-AS2Q96NR7 200 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 ADAM2Q99965 735 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 TPSD1Q9BZJ3 242 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 GLOD4Q9HC38 313 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 CD248Q9HCU0 757 aa6.11□□□□□ -1.43
HMGB1P47-201ENST00000511281 TDRD9Q8NDG6 1382 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 SETD1BQ9UPS6 1966 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 A1L4Q6 167 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 NCR1O76036 304 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 HEXIM1O94992 359 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 CYP3A4P08684 503 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 PPP3CBP16298 524 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 MMP8P22894 467 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 CFPP27918 469 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 HNRNPMP52272 730 aaKnown RBP eCLIP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 CRHR2Q13324 411 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 PRICKLE4Q2TBC4 344 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 HS1BP3Q53T59 392 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 ZNF569Q5MCW4 686 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 LRRC8DQ7L1W4 858 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 FASTKD5Q7L8L6 764 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 LNX2Q8N448 690 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 CCDC89Q8N998 374 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 FSIP1Q8NA03 581 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 TDRD7Q8NHU6 1098 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 FEZF2Q8TBJ5 459 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 NPIPB3Q92617 1050 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 GLG1Q92896 1179 aa6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 REXO5Q96IC2 774 aaKnown RBP6.1□□□□□ -1.43
HMGB1P47-201ENST00000511281 FAR2Q96K12 515 aa6.1□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms